RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF799Q96GE5 643 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 FEVQ99581 238 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 NIPSNAP1Q9BPW8 284 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 WDR76Q9H967 626 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 DDX28Q9NUL7 540 aaKnown RBP12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 DCAF16Q9NXF7 216 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 COMMD3-BMI1R4GMX3 469 aa12.95□□□□□ -0.34
EXOSC3-205ENST00000482614 H3BN98 237 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 J3QLI3 93 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 TCF21O43680 179 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 GYPBP06028 91 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 GATA3P23771 443 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 GRK5P34947 590 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 RPS27P42677 84 aaKnown RBP12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 PCK2Q16822 640 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 KRTAP24-1Q3LI83 254 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 TEX30Q5JUR7 227 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 LYPD4Q6UWN0 246 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 PGAP1Q75T13 922 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 LRRC28Q86X40 367 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 OR10S1Q8NGN2 331 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 SLCO4A1Q96BD0 722 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 MEGF10Q96KG7 1140 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 SIGLEC11Q96RL6 698 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 METTL17Q9H7H0 456 aaPredicted RBP12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 CMC2Q9NRP2 79 aa12.94□□□□□ -0.34
EXOSC3-205ENST00000482614 COL6A5A8TX70 2615 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 H0YL77 283 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 TMEM178BH3BS89 294 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 MLNRO43193 412 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 FOXH1O75593 365 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 SPARCP09486 303 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 CLUP10909 449 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 SLC6A9P48067 706 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 BTG1P62324 171 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 FLOT2Q14254 428 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 TAF13Q15543 124 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 DCAF12L2Q5VW00 463 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 DRAM2Q6UX65 266 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF771Q7L3S4 317 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 MRPL21Q7Z2W9 205 aaKnown RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 SPATA24Q86W54 205 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF511Q8NB15 262 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 OR6K6Q8NGW6 343 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 SPRYD4Q8WW59 207 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 SLC7A6OSQ96CW6 309 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 TMPRSS13Q9BYE2 586 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF556Q9HAH1 456 aa12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 PATZ1Q9HBE1 687 aaKnown RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 PDP1Q9P0J1 537 aaPredicted RBP12.93□□□□□ -0.34
EXOSC3-205ENST00000482614 F5H5P2 479 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 E2F6O75461 281 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 DNAJC8O75937 253 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 PSKH1P11801 424 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 MMP16P51512 607 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 LCN2P80188 198 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 HNRNPA0Q13151 305 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 LINC01590Q5TEZ4 76 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 TMEM179BQ7Z7N9 219 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 MUC20Q8N307 709 aaPredicted RBP12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 CELF2-AS1Q8N7Q2 184 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 COPS4Q9BT78 406 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 SLC22A4Q9H015 551 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 OCEL1Q9H607 264 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 CENPMQ9NSP4 180 aa12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
EXOSC3-205ENST00000482614 MXRA5Q9NR99 2828 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 A0A0A6YYJ9 748 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PPIAL4CA0A0B4J2A2 164 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 TCRBV3S1A0A5B6 114 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 LRRC30A6NM36 301 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 ZNF878C9JN71 531 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 GLCEO94923 617 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 AVPP01185 164 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 CPT2P23786 658 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 POU1F1P28069 291 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 SLC15A1P46059 708 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 PRKXP51817 358 aa12.91□□□□□ -0.34
EXOSC3-205ENST00000482614 RAD23AP54725 363 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms