RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CFAP77Q6ZQR2 320 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 SYT9Q86SS6 491 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 OR2T27Q8NH04 317 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 LGALS12Q96DT0 336 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 TRMT61AQ96FX7 289 aaKnown RBP10.49□□□□□ -0.73
PTPRF-213ENST00000481019 CNN2Q99439 309 aaKnown RBP10.49□□□□□ -0.73
PTPRF-213ENST00000481019 MND1Q9BWT6 205 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 FAM192AQ9GZU8 254 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 ERVK-18Q9QC07 812 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 AASSQ9UDR5 926 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 CMAHPQ9Y471 501 aa10.49□□□□□ -0.73
PTPRF-213ENST00000481019 NIPBLQ6KC79 2804 aaeCLIP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR6C6A6NF89 314 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SMAD7O15105 426 aaKnown RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SGCEO43556 437 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 DOK2O60496 412 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 ADRA2AP08913 450 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SBK2P0C263 348 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SMIM18P0DKX4 95 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SLC2A5P22732 501 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 PCSK6P29122 969 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 HTR5AP47898 357 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 GDI2P50395 445 aaKnown RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 CDH15P55291 814 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 PCBD1P61457 104 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SNRPD2P62316 118 aaKnown RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 EMX1Q04741 257 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 AQP6Q13520 282 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SLC18B1Q6NT16 456 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 SHFQ7M4L6 423 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 KCTD20Q7Z5Y7 419 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 GPR141Q7Z602 305 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR52I1Q8NGK6 324 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR10S1Q8NGN2 331 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR1J2Q8NGS2 313 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 OR6K6Q8NGW6 343 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 VRK1Q99986 396 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 YIPF3Q9GZM5 350 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 TPK1Q9H3S4 243 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 C1orf198Q9H425 327 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 WDR76Q9H967 626 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 PNRC2Q9NPJ4 139 aaKnown RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 KCNG2Q9UJ96 466 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 COMMD3-BMI1R4GMX3 469 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 TLN2Q9Y4G6 2542 aa10.48□□□□□ -0.73
PTPRF-213ENST00000481019 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
PTPRF-213ENST00000481019 NSD1Q96L73 2696 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 CR1P17927 2039 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 A0A096LNT2 108 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 DAPL1A0PJW8 107 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 PTHP01270 115 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 HLA-DQA2P01906 255 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 MT-ND2P03891 347 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 TFAP2AP05549 437 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 LCKP06239 509 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 TACSTD2P09758 323 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF250P15622 560 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF823P16415 610 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 C21orf33P30042 268 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 PPOXP50336 477 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 EFNA4P52798 201 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ACTA2P62736 377 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ACTG2P63267 376 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 SCRN3Q0VDG4 424 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 RAB35Q15286 201 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 LINC01590Q5TEZ4 76 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 UBE2UQ5VVX9 321 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 RGS7BPQ6MZT1 257 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF367Q7RTV3 350 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 SLC16A9Q7RTY1 509 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 BCDIN3DQ7Z5W3 292 aaKnown RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 KLHL36Q8N4N3 616 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 BBS1Q8NFJ9 593 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 OR10H5Q8NGA6 315 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 OR1J1Q8NGS3 322 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 OR1F12Q8NHA8 337 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 SLC25A40Q8TBP6 338 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ASB17Q8WXJ9 295 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 MARS2Q96GW9 593 aaKnown RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 MAP6Q96JE9 813 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 COX4I2Q96KJ9 171 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 C4orf45Q96LM5 186 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 SIGLEC11Q96RL6 698 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ISYNA1Q9NPH2 558 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 ACOT13Q9NPJ3 140 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 PLEK2Q9NYT0 353 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 CYB5R1Q9UHQ9 305 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 DUSP13Q9UII6 198 aa10.47□□□□□ -0.73
PTPRF-213ENST00000481019 CAB39Q9Y376 341 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-213ENST00000481019 SPEF1Q9Y4P9 236 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms