RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 DNAJC9-AS1A6NH13 148 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 ARPC2O15144 300 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 IRF2P14316 349 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 CD80P33681 288 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 MXRA7P84157 204 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.77□□□□□ -0.37
LIMS3-203ENST00000480744 TRAP1Q12931 704 aaKnown RBP12.77□□□□□ -0.37
LIMS3-203ENST00000480744 ECH1Q13011 328 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 MALLQ13021 153 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 BAMBIQ13145 260 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
LIMS3-203ENST00000480744 RSPO1Q2MKA7 263 aaPredicted RBP12.77□□□□□ -0.37
LIMS3-203ENST00000480744 CLEC12AQ5QGZ9 265 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 FAM201AQ5SY85 155 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 BTNL3Q6UXE8 466 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 NAA40Q86UY6 237 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 OR52E2Q8NGJ4 325 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 GNPDA2Q8TDQ7 276 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 NEIL1Q96FI4 390 aaPredicted RBP12.77□□□□□ -0.37
LIMS3-203ENST00000480744 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 TMEM246Q9BRR3 403 aa12.77□□□□□ -0.37
LIMS3-203ENST00000480744 B2RBV5 119 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 HSD17B1P14061 328 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 EGR1P18146 543 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 CALB2P22676 271 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PRTN3P24158 256 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PYCR1P32322 319 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PMELP40967 661 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 GSSP48637 474 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 TPTEP56180 551 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PAX8Q06710 450 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 FOXL1Q12952 345 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 SAMD4BQ5PRF9 694 aaKnown RBP12.76□□□□□ -0.37
LIMS3-203ENST00000480744 C16orf89Q6UX73 402 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 COLCA1Q6ZS62 124 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 MRPL21Q7Z2W9 205 aaKnown RBP12.76□□□□□ -0.37
LIMS3-203ENST00000480744 ZBTB46Q86UZ6 589 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PARP8Q8N3A8 854 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 C19orf18Q8NEA5 215 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 OR8B3Q8NGG8 313 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 OR11L1Q8NGX0 322 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 SPRYD4Q8WW59 207 aaPredicted RBP12.76□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
LIMS3-203ENST00000480744 OR8B2Q96RD0 313 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 EGLN3Q9H6Z9 239 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 UFSP2Q9NUQ7 469 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 CYB5R1Q9UHQ9 305 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 PCDHGB1Q9Y5G3 927 aa12.76□□□□□ -0.37
LIMS3-203ENST00000480744 IGHV2-70DA0A0C4DH43 119 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 IDH3BO43837 385 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 HKR1P10072 659 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF823P16415 610 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 GGT2P36268 569 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
LIMS3-203ENST00000480744 PITPNBP48739 271 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 TSPAN31Q12999 210 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF181Q2M3W8 571 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 PRAMEF6Q5VXH4 476 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 LRRN1Q6UXK5 716 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 ZDHHC21Q8IVQ6 265 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 CYB561A3Q8NBI2 242 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 PROKR2Q8NFJ6 384 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 RAB40AQ8WXH6 277 aa12.75□□□□□ -0.37
LIMS3-203ENST00000480744 PNRC2Q9NPJ4 139 aaKnown RBP12.75□□□□□ -0.37
LIMS3-203ENST00000480744 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
LIMS3-203ENST00000480744 TRAV40A0A0B4J280 105 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 M0R135 149 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 FAM20BO75063 409 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 CPT2P23786 658 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 RAD23AP54725 363 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 MAB21L1Q13394 359 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 OR8G1Q15617 311 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 LYPD2Q6UXB3 125 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 BOLLQ8N9W6 283 aaKnown RBP12.74□□□□□ -0.37
LIMS3-203ENST00000480744 OR9Q2Q8NGE9 314 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 SPTSSAQ969W0 71 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 ZNF799Q96GE5 643 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 MAP6Q96JE9 813 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
LIMS3-203ENST00000480744 MMADHCQ9H3L0 296 aaPredicted RBP12.74□□□□□ -0.37
LIMS3-203ENST00000480744 ZMAT3Q9HA38 289 aaKnown RBP12.74□□□□□ -0.37
LIMS3-203ENST00000480744 IL1RAPQ9NPH3 570 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 TAS2R1Q9NYW7 299 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 KCNG2Q9UJ96 466 aa12.74□□□□□ -0.37
LIMS3-203ENST00000480744 SOX21Q9Y651 276 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms