RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CLEC12AQ5QGZ9 265 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 BTNL3Q6UXE8 466 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 CD300LDQ6UXZ3 194 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 CYP2R1Q6VVX0 501 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 FITM2Q8N6M3 262 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 AQP11Q8NBQ7 271 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 DNAJC9Q8WXX5 260 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
CCM2-213ENST00000480658 ITFG2Q969R8 447 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 ZNF799Q96GE5 643 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 TSSK2Q96PF2 358 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 C7orf69Q9H7B7 122 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 ZNF556Q9HAH1 456 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 PATZ1Q9HBE1 687 aaKnown RBP9.67□□□□□ -0.86
CCM2-213ENST00000480658 GCM1Q9NP62 436 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 PTTG3PQ9NZH4 202 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 MRPL15Q9P015 296 aaKnown RBP9.67□□□□□ -0.86
CCM2-213ENST00000480658 ALPK2Q86TB3 2170 aa9.67□□□□□ -0.86
CCM2-213ENST00000480658 AQP12BA6NM10 295 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 TMEM178BH3BS89 294 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 DCTN6O00399 190 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 WNT9BO14905 357 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 LCATP04180 440 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 SBK2P0C263 348 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 DDOSTP39656 456 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ENTPD1P49961 510 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 NPY4RP50391 375 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 TAF13Q15543 124 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 C11orf91Q3C1V1 193 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ARMCX4Q5H9R4 360 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 OR2T2Q6IF00 324 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
CCM2-213ENST00000480658 LRRN1Q6UXK5 716 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 CFAP77Q6ZQR2 320 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.66□□□□□ -0.86
CCM2-213ENST00000480658 AQP12AQ8IXF9 295 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 OR52H1Q8NGJ2 320 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 Q8TCH9 128 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ITLN1Q8WWA0 313 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ZMYND19Q96E35 227 aaPredicted RBP9.66□□□□□ -0.86
CCM2-213ENST00000480658 MEGF10Q96KG7 1140 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 BTBD10Q9BSF8 475 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 COPS4Q9BT78 406 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 TMPRSS13Q9BYE2 586 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 KIF17Q9P2E2 1029 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 CACNG2Q9Y698 323 aa9.66□□□□□ -0.86
CCM2-213ENST00000480658 ANK3Q12955 4377 aaKnown RBP9.66□□□□□ -0.86
CCM2-213ENST00000480658 FBN3Q75N90 2809 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 H3BN98 237 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 GNGT2O14610 69 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 NDUFA2O43678 99 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 DBHP09172 617 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 RPS2P15880 293 aaKnown RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 ATP6V1B2P21281 511 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 OTX1P32242 354 aaPredicted RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 MSX2P35548 267 aaPredicted RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 CD200P41217 278 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 GK2Q14410 553 aaPredicted RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 MEP1BQ16820 701 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 PCK2Q16822 640 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 TMEM255AQ5JRV8 349 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 SLC35F1Q5T1Q4 408 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 CORO6Q6QEF8 472 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 Q6ZR03 302 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 SHFQ7M4L6 423 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 OR10AD1Q8NGE0 317 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 OR9Q2Q8NGE9 314 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 OR8B3Q8NGG8 313 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 FAM216AQ8WUB2 273 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 SLC7A6Q92536 515 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 SIGLEC11Q96RL6 698 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 SSBP3Q9BWW4 388 aaPredicted RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 TSSK6Q9BXA6 273 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 PRRG3Q9BZD7 231 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 RGCCQ9H4X1 137 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 EGLN3Q9H6Z9 239 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 FN3KRPQ9HA64 309 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 ABCB9Q9NP78 766 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 PNRC2Q9NPJ4 139 aaKnown RBP9.65□□□□□ -0.86
CCM2-213ENST00000480658 CMC2Q9NRP2 79 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 C14orf119Q9NWQ9 140 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 ZNF391Q9UJN7 358 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 COMMD3-BMI1R4GMX3 469 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 MALRD1Q5VYJ5 2156 aa9.65□□□□□ -0.86
CCM2-213ENST00000480658 STAB1Q9NY15 2570 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 LOC105371242A0A075B767 164 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 TCRBV5S2A0A599 114 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 GGT3PA6NGU5 568 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 F5H0A9 414 aaPredicted RBP9.64□□□□□ -0.87
CCM2-213ENST00000480658 PHYHO14832 338 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 TIPRLO75663 272 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 CST1P01037 141 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 GASTP01350 101 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 SPARCP09486 303 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 HSD11B1P28845 292 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 GRK5P34947 590 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 BPIFB3P59826 476 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms