RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 CEP250Q9BV73 2442 aa9.66□□□□□ -0.86
VTI1A-204ENST00000480057 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
VTI1A-204ENST00000480057 PHF3Q92576 2039 aaKnown RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 A0A1B0GVG6 124 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 M0R135 149 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 RRP8O43159 456 aaKnown RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 SULT1B1O43704 296 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 DOK2O60496 412 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 MTRF1O75570 445 aaKnown RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 ALX3O95076 343 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 CNOT4O95628 575 aaKnown RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 TGM6O95932 706 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 PAHP00439 452 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 MAS1P04201 325 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 CSF3P09919 207 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 B4GALT1P15291 398 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF32P17041 273 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR3A2P47893 321 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 UCNP55089 124 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 ARF1P84077 181 aaKnown RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 GUSBP1Q15486 140 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 RAB11BQ15907 218 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 C3AR1Q16581 482 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 BAK1Q16611 211 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 RSPO1Q2MKA7 263 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-204ENST00000480057 HES5Q5TA89 166 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 FBXW9Q5XUX1 488 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR2A2Q6IF42 318 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 FAM57BQ71RH2 274 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 P4HA3Q7Z4N8 544 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 SNX29P2Q8IUI4 249 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 SKA3Q8IX90 412 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 POC5Q8NA72 575 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR6M1Q8NGM8 313 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR5H6Q8NGV6 325 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR51E1Q8TCB6 317 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 HTRA1Q92743 480 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF799Q96GE5 643 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 UQCC2Q9BRT2 126 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 WNT5BQ9H1J7 359 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR10A2Q9H208 303 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 RGCCQ9H4X1 137 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 TMEM138Q9NPI0 162 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 OR5V1Q9UGF6 321 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 V9GYS6 101 aa9.65□□□□□ -0.86
VTI1A-204ENST00000480057 LOC100289279A0A1B0GTE1 492 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 K7ENP7 123 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 GSTZ1O43708 216 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 ALDOBP05062 364 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF20P17024 532 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 RAB3AP20336 220 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 AZGP1P25311 298 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 MPGP29372 298 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 BDKRB2P30411 391 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 PTGER4P35408 488 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 THBS4P35443 961 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 ARR3P36575 388 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 MMP15P51511 669 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 ART1P52961 327 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 MRPS10P82664 201 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 PSG4Q00888 419 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 GALK2Q01415 458 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 TRIQKQ629K1 86 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 INO80CQ6PI98 192 aaPredicted RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 NUFIP2Q7Z417 695 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 LYPD6Q86Y78 171 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 Q8N402 240 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 RBMXL3Q8N7X1 1067 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 OR1J2Q8NGS2 313 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 OR14K1Q8NGZ2 314 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 PTX4Q96A99 478 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 HAVCR1Q96D42 359 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 S100A16Q96FQ6 103 aaKnown RBP9.64□□□□□ -0.87
VTI1A-204ENST00000480057 BOD1Q96IK1 185 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 TAAR6Q96RI8 345 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 GPR84Q9NQS5 396 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 CACNA1CQ13936 2221 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 CFAP54Q96N23 3096 aa9.64□□□□□ -0.87
VTI1A-204ENST00000480057 NCOA6Q14686 2063 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 A0A0A6YYH2 397 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 A0A0G2JMP0 313 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 A0A0X1KG70 313 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 A0A1W2PQ09 198 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 A6NJ64 397 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 F5H5K5 113 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 DHRS3O75911 302 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 HOXB1P14653 301 aaPredicted RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 SPINK2P20155 84 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 HTR2CP28335 458 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 GNALP38405 381 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 HTR5AP47898 357 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 SLC6A9P48067 706 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 P2RY14Q15391 338 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 EIF2S3LQ2VIR3 472 aaKnown RBP9.63□□□□□ -0.87
VTI1A-204ENST00000480057 KRTCAP3Q53RY4 240 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 ZNF774Q6NX45 483 aa9.63□□□□□ -0.87
VTI1A-204ENST00000480057 TMEM53Q6P2H8 277 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms