RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 KLHL21Q9UJP4 597 aa12.14□□□□□ -0.47
ATG4B-218ENST00000479554 PURGQ9UJV8 347 aaKnown RBP12.14□□□□□ -0.47
ATG4B-218ENST00000479554 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-218ENST00000479554 GMPPBQ9Y5P6 360 aa12.14□□□□□ -0.47
ATG4B-218ENST00000479554 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
ATG4B-218ENST00000479554 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 A0A0A6YYJ9 748 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 IMPA2O14732 288 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 GASTP01350 101 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 KITLGP21583 273 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
ATG4B-218ENST00000479554 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 C1orf94Q6P1W5 598 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 PGBD2Q6P3X8 592 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 DNM1P34Q6PK57 102 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 FANK1Q8TC84 345 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 ZNF418Q8TF45 676 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-218ENST00000479554 SLC7A6Q92536 515 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 COG8Q96MW5 612 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 MRPS26Q9BYN8 205 aaKnown RBP12.13□□□□□ -0.47
ATG4B-218ENST00000479554 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 ATPIF1Q9UII2 106 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
ATG4B-218ENST00000479554 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 J3QLI3 93 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 VENTXO95231 258 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 PPP1R3DO95685 299 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 TXNDC12O95881 172 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 TNFRSF1AP19438 455 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 EPHA1P21709 976 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 CRABP1P29762 137 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 CENPAP49450 140 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 RGS6P49758 472 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 ISL1P61371 349 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 ESRRGP62508 458 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 COX10Q12887 443 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 SPRNQ5BIV9 151 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 RBM48Q5RL73 367 aaKnown RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 CD300LDQ6UXZ3 194 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 C1orf229Q6ZS94 237 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 HRASLS5Q96KN8 279 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 ERMAPQ96PL5 475 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-218ENST00000479554 GPA33Q99795 319 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 TMPRSS13Q9BYE2 586 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 NPTNQ9Y639 398 aa12.12□□□□□ -0.47
ATG4B-218ENST00000479554 J3QW42 95 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 RER1O15258 196 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 SURF4O15260 269 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-218ENST00000479554 AVPP01185 164 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 DBHP09172 617 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 SMIM18P0DKX4 95 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 OSMP13725 252 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 GATA3P23771 443 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 SLC6A6P31641 620 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 GGT2P36268 569 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
ATG4B-218ENST00000479554 LCN2P80188 198 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 IL5RAQ01344 420 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 APOFQ13790 326 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 KCNMB1Q16558 191 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 LEG1Q6P5S2 330 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 Q6ZR03 302 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 JAZF1Q86VZ6 243 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 FBLIM1Q8WUP2 373 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 SAMD8Q96LT4 415 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
ATG4B-218ENST00000479554 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
ATG4B-218ENST00000479554 A0A087WXM4 84 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 A6NHS1 94 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 GPANK1O95872 356 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 RENP00797 406 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 SBK2P0C263 348 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 RAC2P15153 192 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 EPHA2P29317 976 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-218ENST00000479554 CRISP1P54107 249 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 HNRNPA0Q13151 305 aaKnown RBP12.1□□□□□ -0.47
ATG4B-218ENST00000479554 MEP1BQ16820 701 aa12.1□□□□□ -0.47
ATG4B-218ENST00000479554 C6orf141Q5SZD1 244 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms