RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 SRA1Q9HD15 236 aaKnown RBP11.05□□□□□ -0.64
VCL-205ENST00000478896 UFSP2Q9NUQ7 469 aa11.05□□□□□ -0.64
VCL-205ENST00000478896 A0A1B0GUS0 222 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 SRRM5B3KS81 715 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 FAM20BO75063 409 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 GMNNO75496 209 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 DIRAS1O95057 198 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 FSTL3O95633 263 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 TXNDC12O95881 172 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 LCATP04180 440 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 ACSM4P0C7M7 580 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 SLC6A6P31641 620 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 MDH1P40925 334 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 PMELP40967 661 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 NPY4RP50391 375 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 RAG2P55895 527 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 FXYD6P3P58550 94 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 HIST1H3AP68431 136 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 MAB21L1Q13394 359 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 GK2Q14410 553 aaPredicted RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 OR8G1Q15617 311 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 KCNJ8Q15842 424 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 SLC36A3Q495N2 470 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 MIDNQ504T8 468 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 HIST2H3PS2Q5TEC6 136 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 RUSC1-AS1Q66K80 236 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 FIP1L1Q6UN15 594 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 PGAP1Q75T13 922 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 TSEN54Q7Z6J9 526 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 CELF2-AS1Q8N7Q2 184 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 BOLLQ8N9W6 283 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 OR4F5Q8NH21 305 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 DACT3Q96B18 629 aaPredicted RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 SLCO4A1Q96BD0 722 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 OR52D1Q9H346 318 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 EFCAB1Q9HAE3 211 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 BEX1Q9HBH7 125 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 NDUFAF4Q9P032 175 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 TMCC3Q9ULS5 477 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 B9D1Q9UPM9 204 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 SAMD4AQ9UPU9 718 aaKnown RBP11.04□□□□□ -0.64
VCL-205ENST00000478896 V9GYQ6 96 aa11.04□□□□□ -0.64
VCL-205ENST00000478896 IGLV1-36A0A0B4J1U3 117 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 C22orf46C9J442 243 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 SASH3O75995 380 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 GGT2P36268 569 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 CD200P41217 278 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 BPIFB3P59826 476 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 SPIBQ01892 262 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 TRAP1Q12931 704 aaKnown RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 ECH1Q13011 328 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 SEC23BQ15437 767 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 OR8B8Q15620 311 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 ZNF362Q5T0B9 420 aaPredicted RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 SFRP4Q6FHJ7 346 aaPredicted RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 COLCA1Q6ZS62 124 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 OR6V1Q8N148 313 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 KIR3DL3Q8N743 410 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 SLC26A10Q8NG04 563 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 Q8TCH9 128 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 WFDC12Q8WWY7 111 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 ADAT1Q9BUB4 502 aaKnown RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 IFT27Q9BW83 186 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 NSRP1Q9H0G5 558 aaKnown RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 FN3KQ9H479 309 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 FN3KRPQ9HA64 309 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 NOX4Q9NPH5 578 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 ERVK-18Q9QC07 812 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 NOP16Q9Y3C1 178 aaKnown RBP11.03□□□□□ -0.64
VCL-205ENST00000478896 MMP24Q9Y5R2 645 aa11.03□□□□□ -0.64
VCL-205ENST00000478896 M0R135 149 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 CCDC22O60826 627 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 TOX4O94842 621 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 GADD45GO95257 159 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 SFTPBP07988 381 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 H2AFXP16104 143 aaPredicted RBP11.02□□□□□ -0.65
VCL-205ENST00000478896 CA6P23280 308 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 CFHR2P36980 270 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 TPTEP56180 551 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 DBPQ10586 325 aaPredicted RBP11.02□□□□□ -0.65
VCL-205ENST00000478896 MPPED2Q15777 294 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 RFX4Q33E94 735 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 CLEC12AQ5QGZ9 265 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 CD276Q5ZPR3 534 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 GLYATQ6IB77 296 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 Q6YL49 198 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 SDR9C7Q8NEX9 313 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 GATAD2BQ8WXI9 593 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 SPTSSAQ969W0 71 aa11.02□□□□□ -0.65
VCL-205ENST00000478896 ZNF799Q96GE5 643 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms