RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ECHS1P30084 290 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 S100A3P33764 101 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 AQP2P41181 271 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 ERVFRD-1P60508 538 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 TXNL4AP83876 142 aaKnown RBP9.74□□□□□ -0.85
HDAC8-217ENST00000478743 PCK2Q16822 640 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 C11orf91Q3C1V1 193 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 CCDC153Q494R4 210 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 KCTD18Q6PI47 426 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-217ENST00000478743 NANOGNBQ7Z5D8 188 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 DTX3Q8N9I9 347 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 DMRTB1Q96MA1 342 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 CPPED1Q9BRF8 314 aaPredicted RBP9.74□□□□□ -0.85
HDAC8-217ENST00000478743 METTL8Q9H825 291 aaKnown RBP9.74□□□□□ -0.85
HDAC8-217ENST00000478743 AKTIPQ9H8T0 292 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 POLE4Q9NR33 117 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 SCOCQ9UIL1 159 aa9.74□□□□□ -0.85
HDAC8-217ENST00000478743 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 OR6C6A6NF89 314 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 CENPBD1B2RD01 187 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 TRIM13O60858 407 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 PTBP3O95758 552 aaKnown RBP9.73□□□□□ -0.85
HDAC8-217ENST00000478743 UMPSP11172 480 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 MSR1P21757 451 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 CA6P23280 308 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 ALDH3A1P30838 453 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 PRKAR1BP31321 381 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 VEGFCP49767 419 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 RGS8P57771 180 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-217ENST00000478743 PCBD1P61457 104 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 NCALDP61601 193 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 TOP3AQ13472 1001 aaPredicted RBP9.73□□□□□ -0.85
HDAC8-217ENST00000478743 MKXQ8IYA7 352 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 TRIML2Q8N7C3 387 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 TCP10LQ8TDR4 215 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 TMEM27Q9HBJ8 222 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 SELENONQ9NZV5 590 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 ZNF229Q9UJW7 825 aa9.73□□□□□ -0.85
HDAC8-217ENST00000478743 SF3B6Q9Y3B4 125 aaKnown RBP9.73□□□□□ -0.85
HDAC8-217ENST00000478743 VGLL3A8MV65 326 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 M0R1W7 72 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 M0R3H8 397 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 F2RL2O00254 374 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 FMO6PO60774 539 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 FUT1P19526 365 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 COX7A1P24310 79 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 CEBPDP49716 269 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 GNG11P61952 73 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 UFM1P61960 85 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 MAD2L1Q13257 205 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 CCDC92Q53HC0 331 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 DHRS4L2Q6PKH6 230 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 PCYOX1LQ8NBM8 494 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 OR4X2Q8NGF9 303 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 RASD2Q96D21 266 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 DUS3LQ96G46 650 aaKnown RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 ZNF583Q96ND8 569 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 ADAT1Q9BUB4 502 aaKnown RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 ZMAT4Q9H898 229 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 CACYBPQ9HB71 228 aaKnown RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 BCL2L10Q9HD36 194 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 MEPEQ9NQ76 525 aaPredicted RBP9.72□□□□□ -0.85
HDAC8-217ENST00000478743 NDUFAF1Q9Y375 327 aa9.72□□□□□ -0.85
HDAC8-217ENST00000478743 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 CPSF4LA6NMK7 179 aaKnown RBP9.71□□□□□ -0.86
HDAC8-217ENST00000478743 C12orf71A8MTZ7 269 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 H7C1C5 153 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 KRT75O95678 551 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 GRPP07492 148 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 DAP3P51398 398 aaKnown RBP9.71□□□□□ -0.86
HDAC8-217ENST00000478743 RAB25P57735 213 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 LCN6P62502 163 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 RPL23AP62750 156 aaKnown RBP9.71□□□□□ -0.86
HDAC8-217ENST00000478743 OR8G1Q15617 311 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 RABL3Q5HYI8 236 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 WDR86Q86TI4 376 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 OR51D1Q8NGF3 324 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 OR5T2Q8NGG2 359 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 BBS10Q8TAM1 723 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 COG8Q96MW5 612 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 RMND5AQ9H871 391 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 INIPQ9NRY2 104 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
HDAC8-217ENST00000478743 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
HDAC8-217ENST00000478743 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
HDAC8-217ENST00000478743 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
HDAC8-217ENST00000478743 A0A1W2PQ09 198 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 A6NLC8 198 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 PRR23D1E9PI22 279 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-217ENST00000478743 NDUFB3O43676 98 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 CHP2O43745 196 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 LY86O95711 162 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 LPLP06858 475 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 ALDOCP09972 364 aaKnown RBP9.7□□□□□ -0.86
HDAC8-217ENST00000478743 FAM153BP0C7A2 387 aa9.7□□□□□ -0.86
HDAC8-217ENST00000478743 PRR23D2P0DMB1 279 aaPredicted RBP9.7□□□□□ -0.86
HDAC8-217ENST00000478743 MYF6P23409 242 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms