RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TRAPPC2LH3BP13 241 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 PHYHO14832 338 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 WNT2P09544 360 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 ACSM4P0C7M7 580 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 HKR1P10072 659 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 RRM2P31350 389 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 PITPNBP48739 271 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 ERFP50548 548 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 MNAT1P51948 309 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 CORO6Q6QEF8 472 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 C16orf89Q6UX73 402 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF620Q6ZNG0 422 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 DCDC5Q6ZRR9 648 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 PARP8Q8N3A8 854 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 FAM86B1Q8N7N1 296 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 OR2T4Q8NH00 348 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 FUZQ9BT04 418 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 ESM1Q9NQ30 184 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 CYB5R1Q9UHQ9 305 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 CDH10Q9Y6N8 788 aa12.12□□□□□ -0.47
SMARCE1-209ENST00000478349 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 DNAJC9-AS1A6NH13 148 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 CLDN34H7C241 214 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 M0R135 149 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 DCTN6O00399 190 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ARPC2O15144 300 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ENSAO43768 121 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 CYB5R3P00387 301 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 GGT2P36268 569 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 CD200P41217 278 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 NPY4RP50391 375 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 BPIFB3P59826 476 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 SEC61A1P61619 476 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 MXRA7P84157 204 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 PAX8Q06710 450 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 GK2Q14410 553 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 OR8G1Q15617 311 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 OTPQ5XKR4 325 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 C9orf139Q6ZV77 190 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 PLPP7Q8NBV4 271 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 SDR9C7Q8NEX9 313 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 Q8TCH9 128 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 RAB40AQ8WXH6 277 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 UPRTQ96BW1 309 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF799Q96GE5 643 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 TMEM165Q9HC07 324 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 IL1RAPQ9NPH3 570 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF69Q9UC07 566 aa12.11□□□□□ -0.47
SMARCE1-209ENST00000478349 MLNRO43193 412 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 SNX3O60493 162 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 GMDSO60547 372 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 DCTN3O75935 186 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 SEMG1P04279 462 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 GSSP48637 474 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 BLVRAP53004 296 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 IL13RA1P78552 427 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 KRTAP27-1Q3LI81 207 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 CD276Q5ZPR3 534 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 DRAM2Q6UX65 266 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 ZDHHC21Q8IVQ6 265 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 TMEM246Q9BRR3 403 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 SP140LQ9H930 580 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 WDR76Q9H967 626 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 TAGLN3Q9UI15 199 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
SMARCE1-209ENST00000478349 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 H0YL77 283 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 NDUFA2O43678 99 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 GPANK1O95872 356 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 LIPFP07098 398 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 TAF13Q15543 124 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 KLF17Q5JT82 389 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 GPR157Q5UAW9 335 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 PGBD2Q6P3X8 592 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 SLCO4A1Q96BD0 722 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 NUDT16L1Q9BRJ7 211 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 MMADHCQ9H3L0 296 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 TBC1D23Q9NUY8 699 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 C14orf119Q9NWQ9 140 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 ERVK-18Q9QC07 812 aa12.09□□□□□ -0.47
SMARCE1-209ENST00000478349 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms