RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 NMNAT3Q96T66 252 aa13.92□□□□□ -0.18
TRIM13-208ENST00000478111 NUDT16L1Q9BRJ7 211 aaKnown RBP13.92□□□□□ -0.18
TRIM13-208ENST00000478111 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
TRIM13-208ENST00000478111 PNRC2Q9NPJ4 139 aaKnown RBP13.92□□□□□ -0.18
TRIM13-208ENST00000478111 DCAF13Q9NV06 445 aaKnown RBP13.92□□□□□ -0.18
TRIM13-208ENST00000478111 AURKCQ9UQB9 309 aa13.92□□□□□ -0.18
TRIM13-208ENST00000478111 ARPC3O15145 178 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 GGT2P36268 569 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 PSMB10P40306 273 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 CD200P41217 278 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 DEFB112Q30KQ8 113 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 GLYATQ6IB77 296 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 C16orf87Q6PH81 154 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 DNM1P34Q6PK57 102 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 BRD3OSQ6XYD6 125 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 DCDC5Q6ZRR9 648 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 ZBTB46Q86UZ6 589 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 C1orf87Q8N0U7 546 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 CELF2-AS1Q8N7Q2 184 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 C19orf18Q8NEA5 215 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 OR8B3Q8NGG8 313 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 OR10S1Q8NGN2 331 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 OR8B2Q96RD0 313 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 HCAR1Q9BXC0 346 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 SLITRK2Q9H156 845 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 CYB5R1Q9UHQ9 305 aa13.91□□□□□ -0.18
TRIM13-208ENST00000478111 OR6C68A6NDL8 312 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 C22orf46C9J442 243 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 F5H5K5 113 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 NDUFAB1O14561 156 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 HOXA3O43365 443 aaPredicted RBP13.9□□□□□ -0.18
TRIM13-208ENST00000478111 FAM20BO75063 409 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 SEMG1P04279 462 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 HIST1H1CP16403 213 aaKnown RBP13.9□□□□□ -0.18
TRIM13-208ENST00000478111 ANOS1P23352 680 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 NUDT2P50583 147 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 PSME3P61289 254 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 MPPED2Q15777 294 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 PRAMEF6Q5VXH4 476 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 OR4K13Q8NH42 304 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 ERGIC1Q969X5 290 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 SLCO4A1Q96BD0 722 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 OR52D1Q9H346 318 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 RPRD1BQ9NQG5 326 aaKnown RBP13.9□□□□□ -0.18
TRIM13-208ENST00000478111 MRPL22Q9NWU5 206 aaKnown RBP13.9□□□□□ -0.18
TRIM13-208ENST00000478111 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 MMP24Q9Y5R2 645 aa13.9□□□□□ -0.18
TRIM13-208ENST00000478111 PHYHO14832 338 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-208ENST00000478111 CCDC22O60826 627 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 OMGP23515 440 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 FGF12P61328 243 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 TRAP1Q12931 704 aaKnown RBP13.89□□□□□ -0.19
TRIM13-208ENST00000478111 ECH1Q13011 328 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 NLRC3Q7RTR2 1065 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 FANK1Q8TC84 345 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 MAP6Q96JE9 813 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 PITX2Q99697 317 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 ATF6BQ99941 703 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 FN3KQ9H479 309 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
TRIM13-208ENST00000478111 SAMD4AQ9UPU9 718 aaKnown RBP13.89□□□□□ -0.19
TRIM13-208ENST00000478111 SRRM5B3KS81 715 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 PTBP3O95758 552 aaKnown RBP13.88□□□□□ -0.19
TRIM13-208ENST00000478111 RENP00797 406 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 LCATP04180 440 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 SLC6A6P31641 620 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 SLC36A3Q495N2 470 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 PGAP1Q75T13 922 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 SPATC1Q76KD6 591 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 RNF148Q8N7C7 305 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 DDOQ99489 341 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 KRCC1Q9NPI7 259 aaPredicted RBP13.88□□□□□ -0.19
TRIM13-208ENST00000478111 UFSP2Q9NUQ7 469 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 CTSZQ9UBR2 303 aa13.88□□□□□ -0.19
TRIM13-208ENST00000478111 C5orf63A6NC05 138 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 FAM181BA6NEQ2 426 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 IRF2P14316 349 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 MMP9P14780 707 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 CA6P23280 308 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 GSSP48637 474 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 BPIFB3P59826 476 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 RELBQ01201 579 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 SRSF4Q08170 494 aaKnown RBP13.87□□□□□ -0.19
TRIM13-208ENST00000478111 KRT72Q14CN4 511 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 Q6YL49 198 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 SDR9C7Q8NEX9 313 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 OR11L1Q8NGX0 322 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 ZNRF4Q8WWF5 429 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 PYURFQ96I23 114 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 IFT27Q9BW83 186 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 GORASP2Q9H8Y8 452 aa13.87□□□□□ -0.19
TRIM13-208ENST00000478111 CD300LBA8K4G0 201 aa13.86□□□□□ -0.19
TRIM13-208ENST00000478111 IDH3BO43837 385 aa13.86□□□□□ -0.19
TRIM13-208ENST00000478111 FCN3O75636 299 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms