RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 CGGBP1Q9UFW8 167 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SLC23A1Q9UHI7 598 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 FLVCR1Q9Y5Y0 555 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GJE1A6NN92 205 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 ZIC3O60481 467 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 CCL4P13236 92 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 RAB3AP20336 220 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 CSNK2A1P68400 391 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SPOCK1Q08629 439 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 H3F3CQ6NXT2 135 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 TEX261Q6UWH6 196 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 OR4D6Q8NGJ1 314 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SNAPC3Q92966 411 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 FGGYQ96C11 551 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SEC22CQ9BRL7 303 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 KCNK15Q9H427 330 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GLTPQ9NZD2 209 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 MGAT4CQ9UBM8 478 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 AUP1Q9Y679 476 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 U3KQ87 197 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 KIF26BQ2KJY2 2108 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 NSG1A0A0A6YYJ2 146 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 H3BSH0 61 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 CBR3O75828 277 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 QDPRP09417 244 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 VSIG10L2P0DP72 767 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 ICAM2P13598 275 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 C4BPBP20851 252 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 LGALSLQ3ZCW2 172 aaPredicted RBP10.81□□□□□ -0.68
PTPRF-212ENST00000477970 JAGN1Q8N5M9 183 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 MEIOBQ8N635 442 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SSC4DQ8WTU2 575 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SF3B5Q9BWJ5 86 aaKnown RBP10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SMOC1Q9H4F8 434 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 CNTD2Q9H8S5 307 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 MRPS18CQ9Y3D5 142 aaKnown RBP10.81□□□□□ -0.68
PTPRF-212ENST00000477970 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 USP34Q70CQ2 3546 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 UBE2QL1A1L167 161 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 A6NL46 340 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 LMX1BO60663 402 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 CCL3P10147 92 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 ANXA7P20073 488 aaKnown RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 HTR2BP41595 481 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 SNRPD2P62316 118 aaKnown RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 RAC1P63000 192 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 MEF2DQ14814 521 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 FAM189A2Q15884 450 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 FAAP20Q6NZ36 180 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 DOK3Q7L591 496 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 RPS19BP1Q86WX3 136 aaKnown RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 FAM46BQ96A09 425 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 DACT3Q96B18 629 aaPredicted RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 ADAT3Q96EY9 351 aaPredicted RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 DCDC2BA2VCK2 349 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 TMEM14DPA8MWL7 114 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 CD3DP04234 171 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 CELA2AP08217 269 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 FOXK1P85037 733 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 PRAMEF20Q5VT98 475 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 GPAT4Q86UL3 456 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 TMEM123Q8N131 208 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
PTPRF-212ENST00000477970 OR5M1Q8NGP8 315 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 OR2I1PQ8NGU4 316 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 OR2T35Q8NGX2 323 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 CCDC107Q8WV48 283 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 PIGQQ9BRB3 760 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 CDCP1Q9H5V8 836 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF69Q9UC07 566 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 PIEZO1Q92508 2521 aa10.8□□□□□ -0.68
PTPRF-212ENST00000477970 PHF3Q92576 2039 aaKnown RBP10.79□□□□□ -0.68
PTPRF-212ENST00000477970 OR6C65A6NJZ3 312 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 RAB27BO00194 218 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 GDF9O60383 454 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF735P0CB33 412 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 TBPP20226 339 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 MFAP5Q13361 173 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 KCNE4Q8WWG9 221 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 NELFAQ9H3P2 528 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 TMEM185BQ9H7F4 350 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 TUBAL3A6NHL2 446 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 EIF1AYO14602 144 aaKnown RBP10.79□□□□□ -0.68
PTPRF-212ENST00000477970 RAMP1O60894 148 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 HPP00738 406 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 MSR1P21757 451 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 GLRX5Q86SX6 157 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 OR8B12Q8NGG6 310 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 OR4D10Q8NGI6 311 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 PNPLA2Q96AD5 504 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 C10orf35Q96D05 121 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 HPF1Q9NWY4 346 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 FOXD3Q9UJU5 478 aaPredicted RBP10.79□□□□□ -0.68
PTPRF-212ENST00000477970 A0A0U1RQV5 110 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms