RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 C15orf32Q32M92 178 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 PAGE2BQ5JRK9 111 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 ZNF620Q6ZNG0 422 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 Q6ZR54 194 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 CENPUQ71F23 418 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 ZCCHC7Q8N3Z6 543 aaKnown RBP3.52□□□□□ -1.85
VPS50-214ENST00000477935 OR4S1Q8NGB4 309 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 CD200R1Q8TD46 325 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 DOK4Q8TEW6 326 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 EEF1AKMT1Q8WVE0 214 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 C11orf52Q96A22 123 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 TBX15Q96SF7 602 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 GPR21Q99679 349 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 C1QTNF6Q9BXI9 259 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 CENPHQ9H3R5 247 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 NARFLQ9H6Q4 476 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 DYNLRB1Q9NP97 96 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 IL1RAPQ9NPH3 570 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 LYARQ9NX58 379 aaKnown RBP3.52□□□□□ -1.85
VPS50-214ENST00000477935 TAS2R13Q9NYV9 303 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 BFARQ9NZS9 450 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 MED11Q9P086 117 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 BCAP29Q9UHQ4 241 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 TRMT6Q9UJA5 497 aaKnown RBP3.52□□□□□ -1.85
VPS50-214ENST00000477935 AUP1Q9Y679 476 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 EXPH5Q8NEV8 1989 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 PLXNB1O43157 2135 aa3.52□□□□□ -1.85
VPS50-214ENST00000477935 A0A0J9YW62 118 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 MACROD2A1Z1Q3 448 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 B4DXG7 233 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 LYNX1G3V0Z9 82 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 PGRMC2O15173 223 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 SIGLEC5O15389 551 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 FADS1O60427 444 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 FOXH1O75593 365 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 CLDN9O95484 217 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ADRA2AP08913 450 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 LYNX1P0DP58 116 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 COL8A2P25067 703 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 FEN1P39748 380 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 EIF1P41567 113 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 OR3A1P47881 315 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 OR3A3P47888 321 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 XKP51811 444 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ABCE1P61221 599 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 EMX1Q04741 257 aaPredicted RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 SCARB2Q14108 478 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 NNATQ16517 81 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 LGSNQ5TDP6 509 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 OR52E8Q6IFG1 317 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ZNF770Q6IQ21 691 aaPredicted RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 CNTN4Q8IWV2 1026 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 TIGD4Q8IY51 512 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ZCCHC24Q8N2G6 241 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 UBE2J2Q8N2K1 259 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 NKAIN3Q8N8D7 197 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 WDR31Q8NA23 367 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 OR4K14Q8NGD5 310 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 CMTM7Q96FZ5 175 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 CCDC28BQ9BUN5 200 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 EFCAB11Q9BUY7 163 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 KIFC1Q9BW19 673 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 MS4A8Q9BY19 250 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ZNF717Q9BY31 904 aaPredicted RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 OCR1Q9BZK8 76 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 TSGA10Q9BZW7 698 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 C16orf95Q9H693 158 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 JPT2Q9H910 190 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 C3orf14Q9HBI5 128 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 PALMDQ9NP74 551 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 SLC17A5Q9NRA2 495 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 EMC3Q9P0I2 261 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ZNF639Q9UID6 485 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 RPUSD1Q9UJJ7 312 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 MRTO4Q9UKD2 239 aaKnown RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 FBXO5Q9UKT4 447 aa3.51□□□□□ -1.85
VPS50-214ENST00000477935 ZNF490Q9ULM2 529 aaPredicted RBP3.51□□□□□ -1.85
VPS50-214ENST00000477935 TMEM129A0AVI4 362 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 SH3PXD2BA1X283 911 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 MAGEB16A2A368 324 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 GOLGA8KD6RF30 607 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 GPR171O14626 319 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 MLNRO43193 412 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 TNFSF12O43508 249 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 VIMP08670 466 aaKnown RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 CT62P0C5K7 136 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ADORA3P0DMS8 318 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CT45A8P0DMV1 189 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CT45A9P0DMV2 189 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CPMP14384 443 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 GRIA1P42261 906 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 EMDP50402 254 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 PSMD4P55036 377 aaKnown RBP3.5□□□□□ -1.85
VPS50-214ENST00000477935 SRPXP78539 464 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 CDKL1Q00532 357 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 ZNF154Q13106 437 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 HERPUD1Q15011 391 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 PDK3Q15120 406 aa3.5□□□□□ -1.85
VPS50-214ENST00000477935 LRRC37A5PQ49AS3 106 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms