RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 NOSIPQ9Y314 301 aaKnown RBP7□□□□□ -1.29
VMA21-203ENST00000477649 TIMM10BQ9Y5J6 103 aa7□□□□□ -1.29
VMA21-203ENST00000477649 DMXL1Q9Y485 3027 aa7□□□□□ -1.29
VMA21-203ENST00000477649 PCNX3Q9H6A9 2034 aa7□□□□□ -1.29
VMA21-203ENST00000477649 ZFHX2Q9C0A1 2572 aaPredicted RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 TRGV5A0A0B4J1U4 118 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 IGHV3-15A0A0B4J1V0 119 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 A0A1B0GTH9 108 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 METTL21EPA6NDL7 271 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 OR6C6A6NF89 314 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 PCNX2A6NKB5 2137 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 J3QL48 77 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 RER1O15258 196 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 PLA2G10O15496 165 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 CEACAM4O75871 244 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 KRT33AO76009 404 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 BPNT1O95861 308 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 IGLV3-1P01715 115 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 IGHG3P01860 377 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 MAS1P04201 325 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 UBBP0CG47 229 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 COX5BP10606 129 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 ARSBP15848 533 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 ZNF24P17028 368 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 SDHBP21912 280 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 CDAP32320 146 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 THBS4P35443 961 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 FAUP35544 74 aaKnown RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 RFX2P48378 723 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 STARP49675 285 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 RAB25P57735 213 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 ZNF121P58317 390 aaPredicted RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 SF3B4Q15427 424 aaKnown RBP eCLIP6.99□□□□□ -1.296e-7■■■■■ 30.8
VMA21-203ENST00000477649 HES5Q5TA89 166 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 AGAP6Q5VW22 663 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 DNM1P46Q6ZS02 220 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 LSRQ86X29 649 aaPredicted RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 MCEMP1Q8IX19 187 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 CADM3Q8N126 398 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 TOMM5Q8N4H5 51 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 DRAXINQ8NBI3 349 aaPredicted RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 PLPP7Q8NBV4 271 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 OR51A4Q8NGJ6 313 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 OR10AC1Q8NH08 325 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 SYNPRQ8TBG9 265 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 FCAMRQ8WWV6 532 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 RELTQ969Z4 430 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 FAM3DQ96BQ1 224 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 SLC25A38Q96DW6 304 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 TECTBQ96PL2 329 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 FOXB1Q99853 325 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 NEURL2Q9BR09 285 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 PRRG4Q9BZD6 226 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 OR10A2Q9H208 303 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 LDAHQ9H6V9 325 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 METTL17Q9H7H0 456 aaPredicted RBP6.99□□□□□ -1.29
VMA21-203ENST00000477649 RNF121Q9H920 327 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 SCPEP1Q9HB40 452 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 PLEK2Q9NYT0 353 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 PLA2G3Q9NZ20 509 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 MALT1Q9UDY8 824 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 SLC5A6Q9Y289 635 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 CACNG2Q9Y698 323 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 FRYLO94915 3013 aa6.99□□□□□ -1.29
VMA21-203ENST00000477649 A0A1B0GTI1 187 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 FAM166BA8MTA8 275 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ZNF587BE7ETH6 402 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 P2RY10O00398 339 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 SGCEO43556 437 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 WNT11O96014 354 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 YES1P07947 543 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 GABRA1P14867 456 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 HLA-DMAP28067 261 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 SLC6A1P30531 599 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 MAGEA5P43359 124 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 POU3F4P49335 361 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 PRKXP51817 358 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ARL6IP1Q15041 203 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 TGIF1Q15583 401 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ODF4Q2M2E3 257 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 KRTAP27-1Q3LI81 207 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 SLC36A2Q495M3 483 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ZBTB37Q5TC79 503 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ZNF813Q6ZN06 617 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 UTS2BQ765I0 119 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 PRSS45Q7RTY3 260 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.98□□□□□ -1.29
VMA21-203ENST00000477649 OR2W3Q7Z3T1 314 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 FGD2Q7Z6J4 655 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.98□□□□□ -1.29
VMA21-203ENST00000477649 ADGRE4PQ86SQ3 457 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 AKAP14Q86UN6 197 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 CCDC36Q8IYA8 594 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 OR1M1Q8NGA1 313 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 OR8B12Q8NGG6 310 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 OR1F12Q8NHA8 337 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 ROBO4Q8WZ75 1007 aa6.98□□□□□ -1.29
VMA21-203ENST00000477649 YIPF5Q969M3 257 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms