RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 MASP2O00187 686 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 OPN1SWP03999 348 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 GBAP04062 536 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TACR1P25103 407 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 CCKARP32238 428 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ATP1B3P54709 279 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 H3F3AP84243 136 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 FZD5Q13467 585 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 HYAL4Q2M3T9 481 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 FAAP20Q6NZ36 180 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 FBXW12Q6X9E4 464 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TMPPEQ6ZT21 453 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 IZUMO1Q8IYV9 350 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 IQCF1Q8N6M8 205 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 PLPP5Q8NEB5 264 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 LGALS14Q8TCE9 139 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 Q8WTZ3 238 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 KLK6Q92876 244 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB39BQ96DA2 213 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TXN2Q99757 166 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 OR10A5Q9H207 317 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ADGRL4Q9HBW9 690 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 PADI1Q9ULC6 663 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 BRWD1Q9NSI6 2320 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TRAV39A0A0B4J263 110 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 C1orf226A1L170 272 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 A8MVM7 634 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 C1QCP02747 245 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 PGAM2P15259 253 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TNFSF10P50591 281 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 RANP62826 216 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 OVCH1Q7RTY7 1134 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 C17orf64Q86WR6 236 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 C9orf40Q8IXQ3 194 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ACOT4Q8N9L9 421 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ABHD4Q8TB40 342 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 FRZBQ92765 325 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 MAL2Q969L2 176 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 S100A16Q96FQ6 103 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TECTBQ96PL2 329 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 EBPLQ9BY08 206 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 TMEM38AQ9H6F2 299 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 IL21RQ9HBE5 538 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 SEMA4GQ9NTN9 838 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC2A8Q9NY64 477 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF223Q9UK11 482 aaPredicted RBP11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 COLEC10Q9Y6Z7 277 aa11.38□□□□□ -0.59
RTFDC1-207ENST00000477573 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 NPIPA7E9PJI5 369 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 LRATO95237 230 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ITGB2P05107 769 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ANXA4P09525 319 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 NPIPA8P0DM63 369 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ERGP11308 486 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ACP5P13686 325 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 COX7A2P14406 83 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 PNLIPP16233 465 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RPL4P36578 427 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 EFNA3P52797 238 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RPS13P62277 151 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RUNX2Q13950 521 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ATXN7L3Q14CW9 347 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB11BQ15907 218 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 FRRS1Q6ZNA5 592 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 BHLHA15Q7RTS1 189 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 RNF175Q8N4F7 328 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 BBS1Q8NFJ9 593 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 OR1L6Q8NGR2 347 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SMPDL3AQ92484 453 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC35E1Q96K37 410 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 APOOQ9BUR5 198 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC35B3Q9H1N7 401 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 TM7SF3Q9NS93 570 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 FBXW2Q9UKT8 454 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 OSGIN2Q9Y236 505 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 FARSAQ9Y285 508 aaKnown RBP11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC17A4Q9Y2C5 497 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 LOC105371242A0A075B767 164 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ARL6IP5O75915 188 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 PPP1R3DO95685 299 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 CXCL1P09341 107 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 OR4A8P0C604 315 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 FOLR1P15328 257 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 GSTM3P21266 225 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 SNCAP37840 140 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 UBE2G2P60604 165 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ALG10BQ5I7T1 473 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 FAM27D1Q5T7N8 215 aa11.37□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF100Q8IYN0 542 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms