RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 LCN8Q6JVE9 175 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 C12orf54Q6X4T0 127 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 MRPL21Q7Z2W9 205 aaKnown RBP13.23□□□□□ -0.29
CLDN11-204ENST00000477531 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.23□□□□□ -0.29
CLDN11-204ENST00000477531 CCDC197Q8NCU1 140 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 ZNF799Q96GE5 643 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 SIGLEC11Q96RL6 698 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 MRI1Q9BV20 369 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 TSSK6Q9BXA6 273 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 MRPL22Q9NWU5 206 aaKnown RBP13.23□□□□□ -0.29
CLDN11-204ENST00000477531 OR5V1Q9UGF6 321 aa13.23□□□□□ -0.29
CLDN11-204ENST00000477531 ANK2Q01484 3957 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 F5H5P2 479 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 H0YL77 283 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 CYB5R3P00387 301 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 FMO3P31513 532 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 HILS1P60008 231 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 ACTG1P63261 375 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 DBPQ10586 325 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 HNRNPA0Q13151 305 aaKnown RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 MICAQ29983 383 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 ARMCX4Q5H9R4 360 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 MOGAT3Q86VF5 341 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 SEMA6DQ8NFY4 1073 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 OR2T33Q8NG76 320 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 OR11L1Q8NGX0 322 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 ZNF420Q8TAQ5 688 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 SLCO4A1Q96BD0 722 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 PLEKHA8Q96JA3 519 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 MAP6Q96JE9 813 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 SLC22A4Q9H015 551 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 PRPF19Q9UMS4 504 aaKnown RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 LRCH1Q9Y2L9 728 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
CLDN11-204ENST00000477531 AUP1Q9Y679 476 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 U3KQV3 271 aa13.22□□□□□ -0.29
CLDN11-204ENST00000477531 ARHGAP32A7KAX9 2087 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 TCRBV5S2A0A599 114 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 TVP23AA6NH52 213 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 MLNRO43193 412 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 RPS2P15880 293 aaKnown RBP13.21□□□□□ -0.29
CLDN11-204ENST00000477531 BLVRAP53004 296 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 PPP1R8Q12972 351 aaKnown RBP13.21□□□□□ -0.29
CLDN11-204ENST00000477531 GK3PQ14409 553 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 ZNF181Q2M3W8 571 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 ZNF770Q6IQ21 691 aaPredicted RBP13.21□□□□□ -0.29
CLDN11-204ENST00000477531 DRAM2Q6UX65 266 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 NAA40Q86UY6 237 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 LNX2Q8N448 690 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 OR51L1Q8NGJ5 315 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 DDOQ99489 341 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 COPS4Q9BT78 406 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 NTN4Q9HB63 628 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
CLDN11-204ENST00000477531 IGHV3-64DA0A0J9YX35 117 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 GGT3PA6NGU5 568 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 RIIAD1A6NNX1 92 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 A8MXK9 166 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 F5H0A9 414 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF205O95201 554 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 FAM107AO95990 144 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 SPARCP09486 303 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 RAP2AP10114 183 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF12P17014 697 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF3P17036 446 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 ENTPD1P49961 510 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 SLC25A1P53007 311 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 ZNF154Q13106 437 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 OR8G1Q15617 311 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 BTNL3Q6UXE8 466 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 NLRC3Q7RTR2 1065 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 DCXRQ7Z4W1 244 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 OR8B3Q8NGG8 313 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 OR8D4Q8NGM9 314 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 FAM216AQ8WUB2 273 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 GCDHQ92947 438 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-204ENST00000477531 OR8B2Q96RD0 313 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 SLC6A7Q99884 636 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 SSBP3Q9BWW4 388 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-204ENST00000477531 TMEM165Q9HC07 324 aa13.2□□□□□ -0.3
CLDN11-204ENST00000477531 MMP26Q9NRE1 261 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms