RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 FLOT2Q14254 428 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 MAPK11Q15759 364 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 SYPL1Q16563 259 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ARHGAP11BQ3KRB8 267 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 LRRC37A5PQ49AS3 106 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 LRRC23Q53EV4 343 aaPredicted RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 PIGGQ5H8A4 983 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 AGAP7PQ5VUJ5 663 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 C1orf146Q5VVC0 180 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 PRAMEF8Q5VWM4 474 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 PRAMEF7Q5VXH5 474 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 GLYATQ6IB77 296 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 REEP3Q6NUK4 255 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 OPN5Q6U736 354 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ISLR2Q6UXK2 745 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 NPSR1Q6W5P4 371 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 SPATA24Q86W54 205 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 CARM1Q86X55 608 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 DHFR2Q86XF0 187 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 PEX5LQ8IYB4 626 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 PRR22Q8IZ63 422 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ZNF619Q8N2I2 560 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 FBXW8Q8N3Y1 598 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 KIF2BQ8N4N8 673 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 BCORP1Q8N888 145 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ANKFN1Q8N957 763 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 APCDD1LQ8NCL9 501 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 CHDHQ8NE62 594 aaPredicted RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 KLHL30-AS1Q8NEE0 82 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 TYMSOSQ8TAI1 123 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 RASSF5Q8WWW0 418 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 LZICQ8WZA0 190 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 POP5Q969H6 163 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 MAL2Q969L2 176 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 TMBIM1Q969X1 311 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ADIPOR1Q96A54 375 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 EFHD2Q96C19 240 aaPredicted RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 NSMCE2Q96MF7 247 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 COL21A1Q96P44 957 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 TRNT1Q96Q11 434 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 UTP23Q9BRU9 249 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 PINK1Q9BXM7 581 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 TRIM4Q9C037 500 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ING2Q9H160 280 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 NXF5Q9H1B4 397 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 IKZF5Q9H5V7 419 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 TMEM38AQ9H6F2 299 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 LIN28AQ9H9Z2 209 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 POLE3Q9NRF9 147 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 HPF1Q9NWY4 346 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 KLHL28Q9NXS3 571 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 STMN3Q9NZ72 180 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ABCD2Q9UBJ2 740 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ZNF107Q9UII5 783 aaPredicted RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 ZNF223Q9UK11 482 aaPredicted RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 YARS2Q9Y2Z4 477 aaKnown RBP3.11□□□□□ -1.91
UBR3-209ENST00000477461 IFT52Q9Y366 437 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 WDR45Q9Y484 360 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 GMEB1Q9Y692 573 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 ZNF292O60281 2723 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 BPTFQ12830 3046 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 EXPH5Q8NEV8 1989 aa3.11□□□□□ -1.91
UBR3-209ENST00000477461 CPAMD8Q8IZJ3 1885 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 NPIPA5A0A0B4J1W7 369 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 OR6C70A6NIJ9 312 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 NPIPA7E9PJI5 369 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 MKRN2OSH3BPM6 223 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 K7ENP7 123 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 M0QX08 132 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 SLC33A1O00400 549 aaPredicted RBP3.1□□□□□ -1.91
UBR3-209ENST00000477461 CCSO14618 274 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 SIGLEC5O15389 551 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 KCNK2O95069 426 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 UTS2O95399 124 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 ZNF682O95780 498 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 OPN1SWP03999 348 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CLPSP04118 112 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 P04436 131 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 DBIP07108 87 aaKnown RBP3.1□□□□□ -1.91
UBR3-209ENST00000477461 TFPTP0C1Z6 253 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 NPIPA8P0DM63 369 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CT45A8P0DMV1 189 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CT45A9P0DMV2 189 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 UQCRBP14927 111 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 ETS2P15036 469 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 NCK1P16333 377 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 GGT1P19440 569 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 AQP1P29972 269 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 LCN1P31025 176 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 FCGR2BP31994 310 aaPredicted RBP3.1□□□□□ -1.91
UBR3-209ENST00000477461 FCGR2CP31995 323 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 IFNA8P32881 189 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CYB561P49447 251 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CCR4P51679 360 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 KCNJ2P63252 427 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 ARG2P78540 354 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 CEACAM7Q14002 265 aa3.1□□□□□ -1.91
UBR3-209ENST00000477461 ZSWIM7Q19AV6 140 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms