RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 DCTN2Q13561 401 aaKnown RBP12.6□□□□□ -0.39
COL4A6-206ENST00000477085 OR2A2Q6IF42 318 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 OR13C3Q8NGS6 347 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF799Q96GE5 643 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 PRORYQ9H606 182 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 GPR84Q9NQS5 396 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 PLSCR4Q9NRQ2 329 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF275Q9NSD4 429 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-206ENST00000477085 CMAHPQ9Y471 501 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 ITPR1Q14643 2758 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 LOC100509620A0A075B734 347 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 RGS5O15539 181 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 HPGDSO60760 199 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 WDR1O75083 606 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 MAS1P04201 325 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 GABRA1P14867 456 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 CCL1P22362 96 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 S100A5P33763 92 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ETV6P41212 452 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 HTR5AP47898 357 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF846Q147U1 533 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 SNX29P2Q8IUI4 249 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF584Q8IVC4 421 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF433Q8N7K0 673 aaPredicted RBP12.59□□□□□ -0.39
COL4A6-206ENST00000477085 OR1J2Q8NGS2 313 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 AP3S1Q92572 193 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 FGGYQ96C11 551 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 ADAT3Q96EY9 351 aaPredicted RBP12.59□□□□□ -0.39
COL4A6-206ENST00000477085 WACQ9BTA9 647 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 PLGRKTQ9HBL7 147 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 TCF7L1Q9HCS4 588 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
COL4A6-206ENST00000477085 SYT7O43581 403 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 APEX1P27695 318 aaKnown RBP12.58□□□□□ -0.39
COL4A6-206ENST00000477085 SLC6A9P48067 706 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 IFITM3Q01628 133 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 ECH1Q13011 328 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 TSC22D1Q15714 1073 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 SLC36A2Q495M3 483 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 Q6ZT83 130 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 ABHD12BQ7Z5M8 362 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-206ENST00000477085 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 OR51A2Q8NGJ7 313 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 S100ZQ8WXG8 99 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 SPTSSAQ969W0 71 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 SGK3Q96BR1 496 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 PGAM5Q96HS1 289 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF75AQ96N20 296 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 WDFY2Q96P53 400 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.39
COL4A6-206ENST00000477085 RNF121Q9H920 327 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 HMG20AQ9NP66 347 aa12.58□□□□□ -0.39
COL4A6-206ENST00000477085 NBEAQ8NFP9 2946 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 DOCK7Q96N67 2140 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 LYZL6O75951 148 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 CD79AP11912 226 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 CCL2P13500 99 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 RAB1AP62820 205 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 GFOD2Q3B7J2 385 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 HES5Q5TA89 166 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 DRAM2Q6UX65 266 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 PLPP7Q8NBV4 271 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 OR5H6Q8NGV6 325 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 OR14K1Q8NGZ2 314 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
COL4A6-206ENST00000477085 V9GY05 133 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 V9GYH0 126 aa12.58□□□□□ -0.4
COL4A6-206ENST00000477085 RTTNQ86VV8 2226 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 GTF3C1Q12789 2109 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 FIGNL2A6NMB9 653 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 GLI4P10075 376 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 SNRPBP14678 240 aaKnown RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 CFL1P23528 166 aaKnown RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 PTGER4P35408 488 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 TIMP3P35625 211 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 TPTEP56180 551 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 GABRA6Q16445 453 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 TBRG1Q3YBR2 411 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 CROCCP3Q8IVE0 287 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 FAM71F1Q96KD3 344 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 SDHCQ99643 169 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 ZNF835Q9Y2P0 537 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
COL4A6-206ENST00000477085 SVILO95425 2214 aa12.57□□□□□ -0.4
COL4A6-206ENST00000477085 A0A0U1RQV5 110 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms