RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 A6NL46 340 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 SMAD9O15198 467 aaKnown RBP10.15□□□□□ -0.78
NUP188-205ENST00000477069 NR2C1P13056 603 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 CSNK1A1P48729 337 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 CX3CR1P49238 355 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 PSMF1Q92530 271 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 LIN37Q96GY3 246 aaPredicted RBP10.15□□□□□ -0.78
NUP188-205ENST00000477069 NAA11Q9BSU3 229 aaPredicted RBP10.15□□□□□ -0.78
NUP188-205ENST00000477069 STRADBQ9C0K7 418 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 NELFAQ9H3P2 528 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 RANBP3Q9H6Z4 567 aaPredicted RBP10.15□□□□□ -0.78
NUP188-205ENST00000477069 SCPEP1Q9HB40 452 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 DLL4Q9NR61 685 aa10.15□□□□□ -0.78
NUP188-205ENST00000477069 FARSAQ9Y285 508 aaKnown RBP10.15□□□□□ -0.78
NUP188-205ENST00000477069 MED12Q93074 2177 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 E9PLN8 166 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 SERPINA7P05543 415 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 LPLP06858 475 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 CPN1P15169 458 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 ANXA7P20073 488 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 MSR1P21757 451 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 FAUP35544 74 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 SELENOPP49908 381 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 CAPZA1P52907 286 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 GRB2P62993 217 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 PMPCAQ10713 525 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 ZNF626Q68DY1 528 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 OR10K2Q6IF99 312 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SLC25A25Q6KCM7 469 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SLC36A1Q7Z2H8 476 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 OR6N1Q8NGY5 312 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SSC4DQ8WTU2 575 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SEC22CQ9BRL7 303 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 FBLN5Q9UBX5 448 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 MEIS3P1A6NDR6 274 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 PYCARD-AS1I3L0S3 204 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 CDX4O14627 284 aaPredicted RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 AKAIN1P0CW23 69 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 ENPP1P22413 925 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 ACER2Q5QJU3 275 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 OR5AS1Q8N127 324 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SLC22A24Q8N4F4 322 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 AQP3Q92482 292 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 SF3B5Q9BWJ5 86 aaKnown RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 ZNF436Q9C0F3 470 aaPredicted RBP10.14□□□□□ -0.79
NUP188-205ENST00000477069 DEPPQ9NTK1 212 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 P4HTMQ9NXG6 502 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 ING4Q9UNL4 249 aa10.14□□□□□ -0.79
NUP188-205ENST00000477069 GJE1A6NN92 205 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 SNRPGP15A8MWD9 76 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 NPIPA2E9PIF3 369 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 NPIPA3F8WFD2 350 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 RAB27BO00194 218 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 SSNA1O43805 119 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 BPNT1O95861 308 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 P04436 131 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 RFPL3SP0C7P2 107 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 VSIG10L2P0DP72 767 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 SLC2A1P11166 492 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 RAB3AP20336 220 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 PRKXP51817 358 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ACTBP60709 375 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ACTG1P63261 375 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 RNF144BQ7Z419 303 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 C20orf196Q8IYI0 205 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 SPICQ8N5J4 248 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ESX1Q8N693 406 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 TMEM229BQ8NBD8 167 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 OR5D14Q8NGL3 314 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 LILRB4Q8NHJ6 448 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 KCNE4Q8WWG9 221 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ADGRG7Q96K78 797 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 GPR137Q96N19 417 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 GPR84Q9NQS5 396 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 FOXJ2Q9P0K8 574 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ELF5Q9UKW6 265 aaPredicted RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 RAB22AQ9UL26 194 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 MRPS18CQ9Y3D5 142 aaKnown RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 FLVCR1Q9Y5Y0 555 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 KMT2EQ8IZD2 1858 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 WDPCPO95876 746 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 CD3DP04234 171 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 MELTFP08582 738 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 GTF2F2P13984 249 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 RAC3P60763 192 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 SNRPD2P62316 118 aaKnown RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 ANGPT1Q15389 498 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 TAF13Q15543 124 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 ZNF260Q3ZCT1 412 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 Q6ZSR3 168 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 NLRC3Q7RTR2 1065 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 LUZP2Q86TE4 346 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 CDH26Q8IXH8 852 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 GABRG1Q8N1C3 465 aa10.13□□□□□ -0.79
NUP188-205ENST00000477069 INTS12Q96CB8 462 aaKnown RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 MYEF2Q9P2K5 600 aaKnown RBP10.13□□□□□ -0.79
NUP188-205ENST00000477069 ZNF107Q9UII5 783 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms