RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ZNF747Q9BV97 191 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 IFT27Q9BW83 186 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 CDADC1Q9BWV3 514 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SSBP3Q9BWW4 388 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-207ENST00000475549 HDHD2Q9H0R4 259 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 EGLN3Q9H6Z9 239 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 IL1RAPQ9NPH3 570 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM100Q9NV29 134 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SAMD4AQ9UPU9 718 aaKnown RBP5.86□□□□□ -1.47
HDAC3-207ENST00000475549 PCDHGB1Q9Y5G3 927 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 ARHGAP32A7KAX9 2087 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 IGHV2-70DA0A0C4DH43 119 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 MDFIC2A0A1B0GVS7 189 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 C22orf46C9J442 243 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 CLDN34H7C241 214 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 BHLHE40O14503 412 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SURF4O15260 269 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 TMPRSS2O15393 492 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 KCNAB3O43448 404 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 OR10H3O60404 316 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 GADD45GO95257 159 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PTBP3O95758 552 aaKnown RBP5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PLATP00750 562 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 GASTP01350 101 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PPIAL4GP0DN37 164 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 RRM2P31350 389 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SLC6A6P31641 620 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PYCR1P32322 319 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PSMB10P40306 273 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SRP9P49458 86 aaKnown RBP5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SPIBQ01892 262 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF92Q03936 586 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 TRAP1Q12931 704 aaKnown RBP5.85□□□□□ -1.47
HDAC3-207ENST00000475549 BAMBIQ13145 260 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF181Q2M3W8 571 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SNAI3Q3KNW1 292 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ESCO2Q56NI9 601 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ARMCX4Q5H9R4 360 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PRAMEF6Q5VXH4 476 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF620Q6ZNG0 422 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 C9orf139Q6ZV77 190 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 MUC20Q8N307 709 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-207ENST00000475549 CYB561A3Q8NBI2 242 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 SDR9C7Q8NEX9 313 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 OR52E2Q8NGJ4 325 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 OR51L1Q8NGJ5 315 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 OR8D4Q8NGM9 314 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 Q8TCH9 128 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 RAB40AQ8WXH6 277 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 UPRTQ96BW1 309 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 PITX2Q99697 317 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 BTBD10Q9BSF8 475 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 MED4Q9NPJ6 270 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 DDX28Q9NUL7 540 aaKnown RBP5.85□□□□□ -1.47
HDAC3-207ENST00000475549 ARL8BQ9NVJ2 186 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 CTSZQ9UBR2 303 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 MIOXQ9UGB7 285 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 LRCH1Q9Y2L9 728 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 POLR1DQ9Y2S0 133 aa5.85□□□□□ -1.47
HDAC3-207ENST00000475549 TVP23AA6NH52 213 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 CD300LBA8K4G0 201 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 IFNL4K9M1U5 179 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 ARPC2O15144 300 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 IDH3BO43837 385 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 FAM20BO75063 409 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 RENP00797 406 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 LCATP04180 440 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 FABP3P05413 133 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 RNASE1P07998 156 aaKnown RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 RPS2P15880 293 aaKnown RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 CA6P23280 308 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 CPT2P23786 658 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 OTX1P32242 354 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 CD200P41217 278 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 GYS2P54840 703 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 SMIM11AP58511 58 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PPP1R8Q12972 351 aaKnown RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 TSPAN31Q12999 210 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 ECH1Q13011 328 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 KRT72Q14CN4 511 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PCK2Q16822 640 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 HSP90B2PQ58FF3 399 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PRR31Q5SQ13 230 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 GLYATL3Q5SZD4 288 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 WDR25Q64LD2 544 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 SFRP4Q6FHJ7 346 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PGM2L1Q6PCE3 622 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 LRRN1Q6UXK5 716 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 RBMS3Q6XE24 437 aaKnown RBP5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PGAP1Q75T13 922 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 C11orf53Q8IXP5 236 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PGAM4Q8N0Y7 254 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 PARP8Q8N3A8 854 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 FITM2Q8N6M3 262 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 CELF2-AS1Q8N7Q2 184 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF511Q8NB15 262 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 OR4C15Q8NGM1 316 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 OR2AE1Q8NHA4 323 aa5.84□□□□□ -1.47
HDAC3-207ENST00000475549 SGMS2Q8NHU3 365 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms