RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZNF583Q96ND8 569 aa16.93■□□□□ 0.3
VPS36-203ENST00000475375 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
VPS36-203ENST00000475375 FN3KRPQ9HA64 309 aa16.93■□□□□ 0.3
VPS36-203ENST00000475375 BTBD17A6NE02 478 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 LGALS8O00214 317 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 SOCS2O14508 198 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 IMPA2O14732 288 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 IFNW1P05000 195 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 ZNF26P17031 533 aaPredicted RBP16.92■□□□□ 0.3
VPS36-203ENST00000475375 CD200P41217 278 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 RAD23AP54725 363 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 SELENOWP63302 87 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 MEP1BQ16820 701 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 CORO6Q6QEF8 472 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 MBOAT2Q6ZWT7 520 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 LDLRAD3Q86YD5 345 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 RNF113BQ8IZP6 322 aaKnown RBP16.92■□□□□ 0.3
VPS36-203ENST00000475375 FAM156AQ8NDB6 213 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 ACOT11Q8WXI4 607 aaPredicted RBP16.92■□□□□ 0.3
VPS36-203ENST00000475375 LRTOMTQ8WZ04 291 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 NUAK2Q9H093 628 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 SIRPDQ9H106 197 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 NMNAT1Q9HAN9 279 aaPredicted RBP16.92■□□□□ 0.3
VPS36-203ENST00000475375 SNX13Q9Y5W8 968 aa16.92■□□□□ 0.3
VPS36-203ENST00000475375 A0A087WUU8 490 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 A0A1B0GWJ7 208 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 SDHAP31040 664 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 MALLQ13021 153 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 GK2Q14410 553 aaPredicted RBP16.91■□□□□ 0.3
VPS36-203ENST00000475375 AGBL2Q5U5Z8 902 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 GPR139Q6DWJ6 353 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 STON2Q8WXE9 905 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 SLCO4A1Q96BD0 722 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 SMURF1Q9HCE7 757 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 VSX1Q9NZR4 365 aaPredicted RBP16.91■□□□□ 0.3
VPS36-203ENST00000475375 LHFPL6Q9Y693 200 aa16.91■□□□□ 0.3
VPS36-203ENST00000475375 A0A0G2JND7 137 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 F5H5K5 113 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 G3V4G9 280 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 FXYD1O00168 92 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 FFAR1O14842 300 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 NDUFB2O95178 105 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 CA6P23280 308 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 KCNMB1Q16558 191 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 TMPRSS11FQ6ZWK6 438 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 PGAP1Q75T13 922 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 BTN2A1Q7KYR7 527 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 MRPL21Q7Z2W9 205 aaKnown RBP16.9■□□□□ 0.3
VPS36-203ENST00000475375 VTCN1Q7Z7D3 282 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 OR2T12Q8NG77 320 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 PITX2Q99697 317 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 C16orf95Q9H693 158 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 TRIM36Q9NQ86 728 aa16.9■□□□□ 0.3
VPS36-203ENST00000475375 NOP16Q9Y3C1 178 aaKnown RBP16.9■□□□□ 0.3
VPS36-203ENST00000475375 TRAV38-1A0A0B4J264 116 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 ZNF816-ZNF321PA0A0X1KG74 233 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 C5orf63A6NC05 138 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 FAM220BPB1ANY3 271 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 MRASO14807 208 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 OR10H3O60404 316 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 GYPAP02724 150 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 LCATP04180 440 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 HIST1H3AP68431 136 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 EGR3Q06889 387 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 HIST2H3PS2Q5TEC6 136 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 PGM2L1Q6PCE3 622 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 DNM1P34Q6PK57 102 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 COLCA1Q6ZS62 124 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 HIST2H3AQ71DI3 136 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 ADCK1Q86TW2 530 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 LINC00346Q8IVM7 164 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 FAM46AQ96IP4 442 aaKnown RBP16.89■□□□□ 0.29
VPS36-203ENST00000475375 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 ADAT1Q9BUB4 502 aaKnown RBP16.89■□□□□ 0.29
VPS36-203ENST00000475375 TMEM5Q9Y2B1 443 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 IER3IP1Q9Y5U9 82 aa16.89■□□□□ 0.29
VPS36-203ENST00000475375 OOEPA6NGQ2 149 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 DVL1O14640 695 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 PIN1P1O15428 100 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 NDUFA2O43678 99 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 ZNF682O95780 498 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 PRB2P02812 416 aaPredicted RBP16.88■□□□□ 0.29
VPS36-203ENST00000475375 ACSM4P0C7M7 580 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 CRABP1P29762 137 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 RSPO1Q2MKA7 263 aaPredicted RBP16.88■□□□□ 0.29
VPS36-203ENST00000475375 PTCHD4Q6ZW05 846 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 VMO1Q7Z5L0 202 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 PIP4P2Q8N4L2 257 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 ST8SIA4Q92187 359 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 SEMA6AQ9H2E6 1030 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 C1orf123Q9NWV4 160 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 ONECUT1Q9UBC0 465 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 VPREB3Q9UKI3 123 aa16.88■□□□□ 0.29
VPS36-203ENST00000475375 CAB39Q9Y376 341 aaPredicted RBP16.88■□□□□ 0.29
VPS36-203ENST00000475375 hCG_1807616A0A1W2PRN6 198 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 A6NLC8 198 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 NPPAP01160 153 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 FBP1P09467 338 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 POU4F2Q12837 409 aa16.87■□□□□ 0.29
VPS36-203ENST00000475375 COX10Q12887 443 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms