RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NDEL1Q9GZM8 345 aa11.65□□□□□ -0.54
CCDC78-209ENST00000474647 NOX4Q9NPH5 578 aa11.65□□□□□ -0.54
CCDC78-209ENST00000474647 ADA2Q9NZK5 511 aa11.65□□□□□ -0.54
CCDC78-209ENST00000474647 SNX13Q9Y5W8 968 aa11.65□□□□□ -0.54
CCDC78-209ENST00000474647 IQCF6A8MYZ5 107 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 C22orf46C9J442 243 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 J3QW42 95 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 SOCS2O14508 198 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 CDC42EP2O14613 210 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 IMPA2O14732 288 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 KHDRBS3O75525 346 aaKnown RBP11.64□□□□□ -0.55
CCDC78-209ENST00000474647 TOX4O94842 621 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 NDUFA7O95182 113 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 KDELR2P33947 212 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 PMELP40967 661 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
CCDC78-209ENST00000474647 SELENOWP63302 87 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 PDCD1Q15116 288 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 ZSCAN26Q16670 478 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 ZBED5Q49AG3 693 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 TBPL2Q6SJ96 375 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 RRM2BQ7LG56 351 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 VTCN1Q7Z7D3 282 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 C1QL4Q86Z23 238 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 OR2T12Q8NG77 320 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 OR11L1Q8NGX0 322 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 ACOT11Q8WXI4 607 aaPredicted RBP11.64□□□□□ -0.55
CCDC78-209ENST00000474647 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
CCDC78-209ENST00000474647 CDRT15Q96T59 188 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 RBM4BQ9BQ04 359 aaKnown RBP11.64□□□□□ -0.55
CCDC78-209ENST00000474647 HCAR1Q9BXC0 346 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 PRDM13Q9H4Q3 707 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 UFSP2Q9NUQ7 469 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 CD300AQ9UGN4 299 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
CCDC78-209ENST00000474647 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 A0A087WUU8 490 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ELOVL7A1L3X0 281 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 AHCYL1O43865 530 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 FAM20BO75063 409 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF682O95780 498 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 HSD17B1P14061 328 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF26P17031 533 aaPredicted RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 SDHAP31040 664 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 CFHR2P36980 270 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 BPIFB3P59826 476 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 KRTAP10-3P60369 221 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 HOXA4Q00056 320 aaPredicted RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 MEP1BQ16820 701 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 PRAMEF6Q5VXH4 476 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 MBOAT2Q6ZWT7 520 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ASRGL1Q7L266 308 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 FAM122BQ7Z309 247 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 TMEM86BQ8N661 226 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 BOLLQ8N9W6 283 aaKnown RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 GATAD2BQ8WXI9 593 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 FAM46AQ96IP4 442 aaKnown RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 KCTD14Q9BQ13 255 aaPredicted RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 HDHD2Q9H0R4 259 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 GMPR2Q9P2T1 348 aaKnown RBP11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ATPIF1Q9UII2 106 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 RPS6KA6Q9UK32 745 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF879B4DU55 563 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 FFAR1O14842 300 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 NPY4RP50391 375 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 METTL11BQ5VVY1 283 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 SFRP4Q6FHJ7 346 aaPredicted RBP11.62□□□□□ -0.55
CCDC78-209ENST00000474647 ASPHD2Q6ICH7 369 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 CORO6Q6QEF8 472 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF841Q6ZN19 808 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 ZNF620Q6ZNG0 422 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 RNF113BQ8IZP6 322 aaKnown RBP11.62□□□□□ -0.55
CCDC78-209ENST00000474647 RNF148Q8N7C7 305 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 SCCPDHQ8NBX0 429 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 TBC1D15Q8TC07 691 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
CCDC78-209ENST00000474647 NUAK2Q9H093 628 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 NMNAT1Q9HAN9 279 aaPredicted RBP11.62□□□□□ -0.55
CCDC78-209ENST00000474647 ACOXLQ9NUZ1 547 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 CTSZQ9UBR2 303 aa11.62□□□□□ -0.55
CCDC78-209ENST00000474647 CENPVL3A0A0U1RRI6 287 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 P2RY10O00398 339 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TNFRSF13BO14836 293 aaPredicted RBP11.61□□□□□ -0.55
CCDC78-209ENST00000474647 GSC2O15499 205 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 GPR137BO60478 399 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 NDUFB2O95178 105 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 FSTL3O95633 263 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 TSPAN15O95858 294 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
CCDC78-209ENST00000474647 GATA4P43694 442 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms