RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 MAB21L1Q13394 359 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 PCK2Q16822 640 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 RPL13AP3Q6NVV1 102 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 SLC27A4Q6P1M0 643 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 USP43Q70EL4 1123 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 ARHGAP24Q8N264 748 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 LINC00471Q8N535 108 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 SPICQ8N5J4 248 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 AQP11Q8NBQ7 271 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 OR51L1Q8NGJ5 315 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 OR2AJ1Q8NGZ0 328 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 ST7LQ8TDW4 575 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 ZFAND2BQ8WV99 257 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 CDADC1Q9BWV3 514 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 TMEM165Q9HC07 324 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 DDX28Q9NUL7 540 aaKnown RBP15.58■□□□□ 0.08
COL7A1-209ENST00000474432 KCNG2Q9UJ96 466 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 PCDHB10Q9UN67 800 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 DOCK11Q5JSL3 2073 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 CEACAM18A8MTB9 384 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF205O95201 554 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 CYB5R3P00387 301 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-209ENST00000474432 HLA-DQA2P01906 255 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF12P17014 697 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 MDH2P40926 338 aaKnown RBP15.57■□□□□ 0.08
COL7A1-209ENST00000474432 PAX2Q02962 417 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 CRMP1Q14194 572 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 OR2T5Q6IEZ7 315 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 DHFR2Q86XF0 187 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 KLHL36Q8N4N3 616 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 TEX29Q8N6K0 151 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 OR52L1Q8NGH7 329 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 OR9Q1Q8NGQ5 310 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 OR2T29Q8NH02 315 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 NANPQ8TBE9 248 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 SLCO4A1Q96BD0 722 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 TSSK6Q9BXA6 273 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 DGCR6LQ9BY27 220 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 MUC13Q9H3R2 512 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 ESM1Q9NQ30 184 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 COMMD3-BMI1R4GMX3 469 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 U3KQV3 271 aa15.57■□□□□ 0.08
COL7A1-209ENST00000474432 LCATP04180 440 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 CLUP10909 449 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 RAD23AP54725 363 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 MICAQ29983 383 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF181Q2M3W8 571 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 SNAI3Q3KNW1 292 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 KLF17Q5JT82 389 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-209ENST00000474432 FAM201AQ5SY85 155 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 MOGAT3Q86VF5 341 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF511Q8NB15 262 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 PROKR2Q8NFJ6 384 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 OR2T4Q8NH00 348 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF418Q8TF45 676 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-209ENST00000474432 DACT3Q96B18 629 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-209ENST00000474432 CLPTM1LQ96KA5 538 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 SLC6A7Q99884 636 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 HCAR1Q9BXC0 346 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 TMEM100Q9NV29 134 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 ARMC1Q9NVT9 282 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 TAS2R1Q9NYW7 299 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 INSIG2Q9Y5U4 225 aa15.56■□□□□ 0.08
COL7A1-209ENST00000474432 IFNL4K9M1U5 179 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 M0R135 149 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ACOT8O14734 319 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 SOX14O95416 240 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 FSTL3O95633 263 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 FAM107AO95990 144 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 GYPBP06028 91 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF823P16415 610 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 CALB2P22676 271 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 GATA4P43694 442 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 SRP9P49458 86 aaKnown RBP15.55■□□□□ 0.08
COL7A1-209ENST00000474432 TPTEP56180 551 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF92Q03936 586 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF154Q13106 437 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 SCGB2A2Q13296 93 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 LINC01590Q5TEZ4 76 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ZDHHC22Q8N966 263 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 ZNF799Q96GE5 643 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 NIPSNAP1Q9BPW8 284 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 TBC1D23Q9NUY8 699 aa15.55■□□□□ 0.08
COL7A1-209ENST00000474432 SAMHD1Q9Y3Z3 626 aaKnown RBP15.55■□□□□ 0.08
COL7A1-209ENST00000474432 SPI1P17947 270 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 CD200P41217 278 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 SLC25A1P53007 311 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 HOXA4Q00056 320 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-209ENST00000474432 TEX30Q5JUR7 227 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 CD300LDQ6UXZ3 194 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 DCXRQ7Z4W1 244 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 MUC20Q8N307 709 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-209ENST00000474432 OR2AE1Q8NHA4 323 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 C22orf15Q8WYQ4 148 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 TMEM246Q9BRR3 403 aa15.54■□□□□ 0.08
COL7A1-209ENST00000474432 PRPF19Q9UMS4 504 aaKnown RBP15.54■□□□□ 0.08
COL7A1-209ENST00000474432 CD300LBA8K4G0 201 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 PTBP3O95758 552 aaKnown RBP15.53■□□□□ 0.08
COL7A1-209ENST00000474432 CD80P33681 288 aa15.53■□□□□ 0.08
COL7A1-209ENST00000474432 PAX8Q06710 450 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms