RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 KRTAP21-3Q3LHN1 58 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 DRAM2Q6UX65 266 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
VAMP4-203ENST00000474047 OR10S1Q8NGN2 331 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 THEM6Q8WUY1 208 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
VAMP4-203ENST00000474047 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 OAZ3Q9UMX2 235 aa12.09□□□□□ -0.47
VAMP4-203ENST00000474047 LOC100289279A0A1B0GTE1 492 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 SAC3D1A6NKF1 404 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 CLDN25C9JDP6 229 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 LILRA1O75019 489 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 TACSTD2P09758 323 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 IGHV4-31P0DP07 118 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 TNFRSF1AP19438 455 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 MVKQ03426 396 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 SLC3A1Q07837 685 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 APOFQ13790 326 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 KRTAP27-1Q3LI81 207 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 SLC35D3Q5M8T2 416 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 PGAP1Q75T13 922 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 BHLHE23Q8NDY6 225 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 OR8G5Q8NG78 346 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 OR13G1Q8NGZ3 307 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 SPRYD4Q8WW59 207 aaPredicted RBP12.08□□□□□ -0.47
VAMP4-203ENST00000474047 RAB1CQ92928 201 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 ABHD6Q9BV23 337 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 GABARAPL1Q9H0R8 117 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 SP140LQ9H930 580 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.47
VAMP4-203ENST00000474047 TGFAP01135 160 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 APOC1P02654 83 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 ADH4P08319 380 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 H2BFMP0C1H6 154 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 PSKH1P11801 424 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 ZNF16P17020 682 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-203ENST00000474047 NAA10P41227 235 aaPredicted RBP12.08□□□□□ -0.48
VAMP4-203ENST00000474047 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 LCN1P1Q5VSP4 162 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 KDM4DQ6B0I6 523 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 FAM166AQ6J272 317 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 BBS1Q8NFJ9 593 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 ST7LQ8TDW4 575 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 HPS1Q92902 700 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 TOR3AQ9H497 397 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 MARCH7Q9H992 704 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
VAMP4-203ENST00000474047 YLPM1P49750 1951 aaKnown RBP12.07□□□□□ -0.48
VAMP4-203ENST00000474047 GGT3PA6NGU5 568 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 TBX1O43435 398 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 SELENOFO60613 162 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 RP2O75695 350 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 ANXA2P07355 339 aaKnown RBP12.07□□□□□ -0.48
VAMP4-203ENST00000474047 LYNP07948 512 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 CD55P08174 381 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 SLC2A1P11166 492 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 HOXB4P17483 251 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-203ENST00000474047 CX3CR1P49238 355 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 RAD23AP54725 363 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 GK2Q14410 553 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-203ENST00000474047 AVPI1Q5T686 147 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 Q6ZR03 302 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 TIGD4Q8IY51 512 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 CIB1Q99828 191 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 RBM4BQ9BQ04 359 aaKnown RBP12.07□□□□□ -0.48
VAMP4-203ENST00000474047 OSBPL10Q9BXB5 764 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 RIBC2Q9H4K1 309 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 IL19Q9UHD0 177 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 KCNS2Q9ULS6 477 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 CACNG2Q9Y698 323 aa12.07□□□□□ -0.48
VAMP4-203ENST00000474047 IQCF6A8MYZ5 107 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 SRP9P49458 86 aaKnown RBP12.06□□□□□ -0.48
VAMP4-203ENST00000474047 PRSS12P56730 875 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 SNAI3Q3KNW1 292 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 TCEANCQ8N8B7 351 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 OTOSQ8NHW6 89 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
VAMP4-203ENST00000474047 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 TEAD3Q99594 435 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 PKP2Q99959 881 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 BRD7Q9NPI1 651 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 DNAJC27Q9NZQ0 273 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 ISPDA4D126 451 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 PRKYO43930 277 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 LMX1BO60663 402 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 OTX1P32242 354 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-203ENST00000474047 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 SLX4IPQ5VYV7 408 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 RHOUQ7L0Q8 258 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 SLC16A9Q7RTY1 509 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 LINC01356Q8N9X3 169 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 OR2AE1Q8NHA4 323 aa12.06□□□□□ -0.48
VAMP4-203ENST00000474047 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms