RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 GPX8Q8TED1 209 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 GLYATL2Q8WU03 294 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CAPSLQ8WWF8 208 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 S100ZQ8WXG8 99 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ANKRD9Q96BM1 317 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ISOC1Q96CN7 298 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PIK3IP1Q96FE7 263 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 DCUN1D1Q96GG9 259 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TMEM101Q96IK0 257 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PRRC1Q96M27 445 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 JSRP1Q96MG2 331 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 DOK1Q99704 481 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 RARRES2Q99969 163 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 THTPAQ9BU02 230 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CALN1Q9BXU9 219 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 OR11A1Q9GZK7 315 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 BLZF1Q9H2G9 400 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CDC42EP4Q9H3Q1 356 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 UGT1A7Q9HAW7 530 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 UGT1A10Q9HAW8 530 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 UGT1A8Q9HAW9 530 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 FGF20Q9NP95 211 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 SLC7A10Q9NS82 523 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 TBC1D24Q9ULP9 559 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PACSIN2Q9UNF0 486 aaPredicted RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 PSMD13Q9UNM6 376 aa3.09□□□□□ -1.91
BRCA1-212ENST00000473961 RBMX2Q9Y388 322 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 CHTOPQ9Y3Y2 248 aaKnown RBP3.09□□□□□ -1.91
BRCA1-212ENST00000473961 EDC4Q6P2E9 1401 aaKnown RBP3.09□□□□□ -1.92
BRCA1-212ENST00000473961 SLIT3O75094 1523 aa3.09□□□□□ -1.92
BRCA1-212ENST00000473961 SPEF2Q9C093 1822 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 A0A087X0T9 212 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 OR5K4A6NMS3 321 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 LYRM9A8MSI8 78 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 FAM25AB3EWG3 89 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 FAM25CB3EWG5 89 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 FAM25GB3EWG6 89 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CLDN25C9JDP6 229 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PSMD11O00231 422 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 XKRYO14609 159 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 MRPS12O15235 138 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 HDAC3O15379 428 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ZW10O43264 779 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 SULT1B1O43704 296 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 KLRC4O43908 158 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 KLF8O95600 359 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CLIC3O95833 236 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 HPNP05981 417 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 GIG44P09565 113 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 GIPP09681 153 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CSF3P09919 207 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 GKN3PP0CG01 181 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PSMC3P17980 439 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ZBTB25P24278 435 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 DCKP27707 260 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CSNK1EP49674 416 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 AP2S1P53680 142 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 TMBIM6P55061 237 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PRPS1P60891 318 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 TWF1Q12792 350 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CDC20Q12834 499 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 STX3Q13277 289 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 DOC2AQ14183 400 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 LRRC10Q5BKY1 277 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 TMEM220Q6QAJ8 160 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 TMEM179Q6ZVK1 233 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 AKAP14Q86UN6 197 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 UBL4BQ8N7F7 174 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ASCC1Q8N9N2 400 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 FBXL13Q8NEE6 735 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 OR10Z1Q8NGY1 313 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 FAM151AQ8WW52 585 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 DCUN1D4Q92564 292 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 NRGNQ92686 78 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ARPC1AQ92747 370 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 C12orf43Q96C57 262 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 MED8Q96G25 268 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CNBD2Q96M20 576 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 OSBPL11Q9BXB4 747 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 OR51M1Q9H341 326 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 OR51J1Q9H342 316 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 TRABDQ9H4I3 376 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 RPF2Q9H7B2 306 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 HMG20AQ9NP66 347 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 SLCO1B3Q9NPD5 702 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 CCDC59Q9P031 241 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PDP1Q9P0J1 537 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 XCL2Q9UBD3 114 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PEF1Q9UBV8 284 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 NEUROG3Q9Y4Z2 214 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 RLFQ13129 1914 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 LRRK1Q38SD2 2015 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 PHF3Q92576 2039 aaKnown RBP3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ADAMTS13Q76LX8 1427 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 NOTCH3Q9UM47 2321 aa3.08□□□□□ -1.92
BRCA1-212ENST00000473961 ECM29Q5VYK3 1845 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 MYO5BQ9ULV0 1848 aa3.07□□□□□ -1.92
BRCA1-212ENST00000473961 RAI1Q7Z5J4 1906 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms