RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TSEN54Q7Z6J9 526 aaKnown RBP10.38□□□□□ -0.75
TRAF4-209ENST00000473421 VTCN1Q7Z7D3 282 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 C1orf87Q8N0U7 546 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 PPP1R35Q8TAP8 253 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 APOBEC3DQ96AK3 386 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-209ENST00000473421 TPD52L3Q96J77 140 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
TRAF4-209ENST00000473421 GRHPRQ9UBQ7 328 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 BAG5Q9UL15 447 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 FOXJ3Q9UPW0 622 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 IGHV3OR15-7A0A075B7D8 119 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 MEGF11A6BM72 1044 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 LGALS8O00214 317 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 DVL1O14640 695 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 TSPAN9O75954 239 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 ACSM4P0C7M7 580 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 CA6P23280 308 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 RPL4P36578 427 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 CD200P41217 278 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 CDKN2AP42771 156 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 LSM6P62312 80 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 ST3GAL3Q11203 375 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 C2orf68Q2NKX9 166 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 BEND6Q5SZJ8 279 aaPredicted RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 METTL11BQ5VVY1 283 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 SLC35E4Q6ICL7 350 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 FAM90A1Q86YD7 464 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 GLB1L2Q8IW92 636 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 RASSF5Q8WWW0 418 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 SLCO4A1Q96BD0 722 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 SEH1LQ96EE3 360 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 PRRC1Q96M27 445 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 MAGEB18Q96M61 343 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 COG8Q96MW5 612 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 ZNF570Q96NI8 536 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 WACQ9BTA9 647 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 POLR2J2Q9GZM3 115 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 POLR2J3Q9H1A7 115 aaKnown RBP10.37□□□□□ -0.75
TRAF4-209ENST00000473421 TOR3AQ9H497 397 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 ERVK-18Q9QC07 812 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 RPS6KA6Q9UK32 745 aa10.37□□□□□ -0.75
TRAF4-209ENST00000473421 ELOVL7A1L3X0 281 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 SOCS2O14508 198 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 PIN1P1O15428 100 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 PTP4A3O75365 173 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 KHDRBS3O75525 346 aaKnown RBP10.36□□□□□ -0.75
TRAF4-209ENST00000473421 OPN1MWP04001 364 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 OPN1MW2P0DN77 364 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 OPN1MW3P0DN78 364 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 PAX6P26367 422 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 KDELR2P33947 212 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 RGS6P49758 472 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 KLRD1Q13241 179 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 KRR1Q13601 381 aaKnown RBP10.36□□□□□ -0.75
TRAF4-209ENST00000473421 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 ZBED5Q49AG3 693 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 LINC00346Q8IVM7 164 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 LYG1Q8N1E2 194 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 OR5L1Q8NGL2 311 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 C17orf50Q8WW18 174 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 NMNAT1Q9HAN9 279 aaPredicted RBP10.36□□□□□ -0.75
TRAF4-209ENST00000473421 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
TRAF4-209ENST00000473421 RNF7Q9UBF6 113 aa10.36□□□□□ -0.75
TRAF4-209ENST00000473421 COL7A1Q02388 2944 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 IGLV1-36A0A0B4J1U3 117 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 F5H5K5 113 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 RNASEK-C17orf49H0YIS7 233 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 XKRYO14609 159 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 TFF1P04155 84 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 IRF2P14316 349 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 AMY2BP19961 511 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 NPY4RP50391 375 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 OR8B8Q15620 311 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 CD276Q5ZPR3 534 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 DHRS7BQ6IAN0 325 aaPredicted RBP10.35□□□□□ -0.75
TRAF4-209ENST00000473421 GDPGP1Q6ZNW5 385 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 C1orf122Q6ZSJ8 110 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 TMPRSS11FQ6ZWK6 438 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 CROCCP2Q86T23 111 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 OFCC1Q8IZS5 231 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 GCSAMQ8N6F7 178 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 Q8N7P7 452 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 FAM156AQ8NDB6 213 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 OR11L1Q8NGX0 322 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 FAM46AQ96IP4 442 aaKnown RBP10.35□□□□□ -0.75
TRAF4-209ENST00000473421 COQ7Q99807 217 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 RABEP2Q9H5N1 569 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 PPP1R3EQ9H7J1 279 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 NRIP3Q9NQ35 241 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 ZNRD1Q9P1U0 126 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 RPUSD1Q9UJJ7 312 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms