RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 MED20Q9H944 212 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 MRPL22Q9NWU5 206 aaKnown RBP9.79□□□□□ -0.84
CPNE1-222ENST00000473373 DNAJB9Q9UBS3 223 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 CYB5R1Q9UHQ9 305 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 CACNG2Q9Y698 323 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 COMMD3-BMI1R4GMX3 469 aa9.79□□□□□ -0.84
CPNE1-222ENST00000473373 ARHGAP32A7KAX9 2087 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ANK3Q12955 4377 aaKnown RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ARRDC5A6NEK1 342 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF878C9JN71 531 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF593O00488 134 aaPredicted RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 GSC2O15499 205 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 TIPRLO75663 272 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 RP2O75695 350 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ANXA2P07355 339 aaKnown RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 MSMBP08118 114 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ACSM4P0C7M7 580 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 CLUP10909 449 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 PRKACGP22612 351 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 SLC15A1P46059 708 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 SRP9P49458 86 aaKnown RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 PRKXP51817 358 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 PRSS12P56730 875 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 GINS1Q14691 196 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ACSM5Q6NUN0 579 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 FAHD2BQ6P2I3 314 aaPredicted RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 LYPD4Q6UWN0 246 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 KLHL36Q8N4N3 616 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 ZNF511Q8NB15 262 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 OR8G5Q8NG78 346 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 TMEM186Q96B77 213 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 SLCO4A1Q96BD0 722 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 SLC7A6OSQ96CW6 309 aaPredicted RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 SLAMF6Q96DU3 332 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 FAHD2AQ96GK7 314 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 OR2V2Q96R30 315 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 INTS14Q96SY0 518 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 CADM1Q9BY67 442 aaKnown RBP9.78□□□□□ -0.84
CPNE1-222ENST00000473373 CMC2Q9NRP2 79 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 TMEM100Q9NV29 134 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 HIF1ANQ9NWT6 349 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 IL19Q9UHD0 177 aa9.78□□□□□ -0.84
CPNE1-222ENST00000473373 IGHV3-64DA0A0J9YX35 117 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 LRRC30A6NM36 301 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 FAM157AC9JC47 383 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 WNT9BO14905 357 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 HMGN1P05114 100 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 CD55P08174 381 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 OSMP13725 252 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 GSTT1P30711 240 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 SLC25A1P53007 311 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 DVL1P1P54792 670 aaPredicted RBP9.77□□□□□ -0.85
CPNE1-222ENST00000473373 GRB2P62993 217 aaKnown RBP9.77□□□□□ -0.85
CPNE1-222ENST00000473373 HIST1H3AP68431 136 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 BNIP1Q12981 228 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 CDK5R2Q13319 367 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 TIGD6Q17RP2 521 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 GFOD2Q3B7J2 385 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM255AQ5JRV8 349 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 HIST2H3PS2Q5TEC6 136 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 PLBD1Q6P4A8 553 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 FBXW12Q6X9E4 464 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 HIST2H3AQ71DI3 136 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 SHFQ7M4L6 423 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM179BQ7Z7N9 219 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 HS3ST5Q8IZT8 346 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 MAP6Q96JE9 813 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 RBM4Q9BWF3 364 aaKnown RBP9.77□□□□□ -0.85
CPNE1-222ENST00000473373 PRRG3Q9BZD7 231 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 SP140LQ9H930 580 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 BRD7Q9NPI1 651 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 PAPOLBQ9NRJ5 636 aaKnown RBP9.77□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM106BQ9NUM4 274 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 DNAJC27Q9NZQ0 273 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 NOP16Q9Y3C1 178 aaKnown RBP9.77□□□□□ -0.85
CPNE1-222ENST00000473373 NPTNQ9Y639 398 aa9.77□□□□□ -0.85
CPNE1-222ENST00000473373 TRAV20A0A0B4J274 112 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 TCRBV3S1A0A5B6 114 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 IQCF6A8MYZ5 107 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 ADH4P08319 380 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 H2BFMP0C1H6 154 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 SLC2A1P11166 492 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 SCGB2A2Q13296 93 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 OR8G1Q15617 311 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 SNAPC1Q16533 368 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 DCAF12L2Q5VW00 463 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 DRAM2Q6UX65 266 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 CD300LDQ6UXZ3 194 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 DPY19L4Q7Z388 723 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 NAA40Q86UY6 237 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 C1orf87Q8N0U7 546 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 OR11L1Q8NGX0 322 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 OR2AE1Q8NHA4 323 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 DNAJC9Q8WXX5 260 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 TMEM158Q8WZ71 300 aa9.76□□□□□ -0.85
CPNE1-222ENST00000473373 ZMYND19Q96E35 227 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms