RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ERCC1P07992 297 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-207ENST00000473212 PRKACAP17612 351 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 HLA-GP17693 338 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 RAB6AP20340 208 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 ANOS1P23352 680 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 GNALP38405 381 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 INPP5JQ15735 1006 aaPredicted RBP18.81■□□□□ 0.6
COL18A1-207ENST00000473212 NKAIN3Q8N8D7 197 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 OR52N4Q8NGI2 321 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 PIGMQ9H3S5 423 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 MMACHCQ9Y4U1 282 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 A0A1W2PQD3 144 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 MS4A18H0YCH9 400 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 NDUFA2O43678 99 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 FADS1O60427 444 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 GNB3P16520 340 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 MS4A18Q3C1V0 323 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 DMRTC1Q5HYR2 192 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 RAB12Q6IQ22 244 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 OR10Z1Q8NGY1 313 aa18.81■□□□□ 0.6
COL18A1-207ENST00000473212 OR7A5Q15622 319 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 PABPC1L2AQ5JQF8 200 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 TMEM244Q5VVB8 128 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF813Q6ZN06 617 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 ZDHHC22Q8N966 263 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 SPACA5Q96QH8 159 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 NUDT22Q9BRQ3 303 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 PTGES2Q9H7Z7 377 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 SLC39A1Q9NY26 324 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 CYB5R1Q9UHQ9 305 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 FTCDNL1E5RQL4 147 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 CD38P28907 300 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 FBXW4P57775 412 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 GRINAQ7Z429 371 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 GKN2Q86XP6 184 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-207ENST00000473212 CCDC36Q8IYA8 594 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 FOXRED1Q96CU9 486 aaPredicted RBP18.8■□□□□ 0.6
COL18A1-207ENST00000473212 SLC5A6Q9Y289 635 aa18.8■□□□□ 0.6
COL18A1-207ENST00000473212 C13orf42A0A1B0GVH6 325 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 GPR31O00270 319 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 ABCD4O14678 606 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 ATG12O94817 140 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 H2BFMP0C1H6 154 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 DCAF7P61962 342 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 SMRP1Q8NCR6 262 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF248Q8NDW4 579 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 OR1N1Q8NGS0 311 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 FN3KRPQ9HA64 309 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 HPF1Q9NWY4 346 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 A0A1W2PR77 199 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 C5orf51A6NDU8 294 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 EFSO43281 561 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 FBLP22087 321 aaKnown RBP18.79■□□□□ 0.6
COL18A1-207ENST00000473212 SOX7Q9BT81 388 aa18.79■□□□□ 0.6
COL18A1-207ENST00000473212 PURGQ9UJV8 347 aaKnown RBP18.79■□□□□ 0.6
COL18A1-207ENST00000473212 RHPN2P1A8MT19 583 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 H3BML4 177 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF208O43345 1280 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 PMP2P02689 132 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 VSIG8P0DPA2 414 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 PGAM2P15259 253 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 POU3F1Q03052 451 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-207ENST00000473212 SLC29A4Q7RTT9 530 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 ADAT3Q96EY9 351 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-207ENST00000473212 TSNAXQ99598 290 aaKnown RBP18.78■□□□□ 0.6
COL18A1-207ENST00000473212 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-207ENST00000473212 SELENOIQ9C0D9 397 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF304Q9HCX3 659 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 FREM2Q5SZK8 3169 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 MPZP25189 248 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 ARL4DP49703 201 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 OR5AP2Q8NGF4 316 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 SAV1Q9H4B6 383 aaPredicted RBP18.78■□□□□ 0.6
COL18A1-207ENST00000473212 COPS7AQ9UBW8 275 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 KCNK7Q9Y2U2 307 aa18.78■□□□□ 0.6
COL18A1-207ENST00000473212 TMEM218A2RU14 115 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 NPIPA5E9PKD4 350 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 IFNA6P05013 189 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 QRFPP83859 136 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 TMEM88Q6PEY1 159 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 UQCC3Q6UW78 93 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 TSTD1Q8NFU3 115 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 OR5T2Q8NGG2 359 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 ASB10Q8WXI3 467 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 DAZLQ92904 295 aaKnown RBP18.77■□□□□ 0.6
COL18A1-207ENST00000473212 ZC3H10Q96K80 434 aaKnown RBP18.77■□□□□ 0.6
COL18A1-207ENST00000473212 CHMP1AQ9HD42 196 aaPredicted RBP18.77■□□□□ 0.6
COL18A1-207ENST00000473212 NPIPA1Q9UND3 350 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 CSAG2Q9Y5P2 127 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 OR2T1O43869 369 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 SERPINF1P36955 418 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 ZNF441Q8N8Z8 693 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 MARCH1Q8TCQ1 289 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 WNT2BQ93097 391 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 ZDHHC12Q96GR4 267 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 SUSD2Q9UGT4 822 aa18.77■□□□□ 0.6
COL18A1-207ENST00000473212 PCP4L1A6NKN8 68 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 TO15178 435 aa18.76■□□□□ 0.59
COL18A1-207ENST00000473212 CRHP06850 196 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms