RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 BHLHE40O14503 412 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-203ENST00000472892 HLA-DQA2P01906 255 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 PMELP40967 661 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 GATA4P43694 442 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 PAX8Q06710 450 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
VTI1A-203ENST00000472892 ESCO2Q56NI9 601 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 KLF17Q5JT82 389 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-203ENST00000472892 SLC35F1Q5T1Q4 408 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
VTI1A-203ENST00000472892 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 LINC00471Q8N535 108 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 BHLHE23Q8NDY6 225 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 C22orf15Q8WYQ4 148 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 MAP6Q96JE9 813 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 TRIM15Q9C019 465 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 EGLN3Q9H6Z9 239 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 NUP50Q9UKX7 468 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 LRCH1Q9Y2L9 728 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 CDH10Q9Y6N8 788 aa12.82□□□□□ -0.36
VTI1A-203ENST00000472892 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 DCTN3O75935 186 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 GASTP01350 101 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 LCATP04180 440 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 HLA-DPB1P04440 258 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF823P16415 610 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 GYS2P54840 703 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 TPTEP56180 551 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 GNGT1P63211 74 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 PAX2Q02962 417 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 MALLQ13021 153 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 MAB21L1Q13394 359 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 CLEC12AQ5QGZ9 265 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 MOGAT3Q86VF5 341 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 CELF2-AS1Q8N7Q2 184 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 OR4C15Q8NGM1 316 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 ZNRF4Q8WWF5 429 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 SLCO4A1Q96BD0 722 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 BTBD10Q9BSF8 475 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 ACTR3BQ9P1U1 418 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 MIOXQ9UGB7 285 aa12.81□□□□□ -0.36
VTI1A-203ENST00000472892 IGHV3-64DA0A0J9YX35 117 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 TNFRSF11BO00300 401 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF205O95201 554 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 CD80P33681 288 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 MAGEA2P43356 314 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 MNAT1P51948 309 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 UBA52P62987 128 aaKnown RBP12.8□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF404Q494X3 552 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 RASSF6Q6ZTQ3 369 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 PGAP1Q75T13 922 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 KLBQ86Z14 1044 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 C1orf87Q8N0U7 546 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 OR9Q2Q8NGE9 314 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 OR52L1Q8NGH7 329 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 OR2T4Q8NH00 348 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 Q8TCH9 128 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 SPTSSAQ969W0 71 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 ERGIC1Q969X5 290 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 TMEM246Q9BRR3 403 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 MRI1Q9BV20 369 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 SSBP3Q9BWW4 388 aaPredicted RBP12.8□□□□□ -0.36
VTI1A-203ENST00000472892 PLA2G12AQ9BZM1 189 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 DDX28Q9NUL7 540 aaKnown RBP12.8□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF69Q9UC07 566 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 OR5V1Q9UGF6 321 aa12.8□□□□□ -0.36
VTI1A-203ENST00000472892 M0R135 149 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 RPS2P15880 293 aaKnown RBP12.79□□□□□ -0.36
VTI1A-203ENST00000472892 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 OTX1P32242 354 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-203ENST00000472892 PYCR1P32322 319 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 CD200P41217 278 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 RAD23AP54725 363 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 MXRA7P84157 204 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 PCK2Q16822 640 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 CYP2R1Q6VVX0 501 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
VTI1A-203ENST00000472892 DOK3Q7L591 496 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 LNX2Q8N448 690 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 C3orf56Q8N813 242 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 CYB561A3Q8NBI2 242 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 PROKR2Q8NFJ6 384 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 OR8D4Q8NGM9 314 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-203ENST00000472892 RAB40AQ8WXH6 277 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 DACT3Q96B18 629 aaPredicted RBP12.79□□□□□ -0.36
VTI1A-203ENST00000472892 ZNF799Q96GE5 643 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 PPIAL4AQ9Y536 164 aa12.79□□□□□ -0.36
VTI1A-203ENST00000472892 TCRBV5S2A0A599 114 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 TVP23AA6NH52 213 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 B2RBV5 119 aa12.78□□□□□ -0.36
VTI1A-203ENST00000472892 CCNB2O95067 398 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms