RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OTX1P32242 354 aaPredicted RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 SLC39A6Q13433 755 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 TMEM105Q8N8V8 129 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 NRGNQ92686 78 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 NRBF2Q96F24 287 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 TGS1Q96RS0 853 aaKnown RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 RSG1Q9BU20 258 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 ACTR3CQ9C0K3 210 aaPredicted RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 TMEM38AQ9H6F2 299 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 EXOSC4Q9NPD3 245 aaKnown RBP2.8□□□□□ -1.96
CLK1-209ENST00000472679 MED4Q9NPJ6 270 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 NMRK1Q9NWW6 199 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 CBY1Q9Y3M2 126 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 SHANK1Q9Y566 2161 aa2.8□□□□□ -1.96
CLK1-209ENST00000472679 IGHV3-72A0A0B4J1Y9 119 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 IGHV1-69DA0A0B4J2H0 117 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 IGHV7-4-1A0A0J9YVY3 117 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 NMT2O60551 498 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 IL32P24001 234 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 CYP24A1Q07973 514 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 NCF4Q15080 339 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 TPTE2P1Q5T6R2 138 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 TTC23LQ6PF05 361 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 CSGALNACT2Q8N6G5 542 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 SNX31Q8N9S9 440 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 OR4C5Q8NGB2 326 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 OR9G4Q8NGQ1 327 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 TMEM185BQ9H7F4 350 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 NEK6Q9HC98 313 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 ACP6Q9NPH0 428 aa2.79□□□□□ -1.96
CLK1-209ENST00000472679 TRAV6A0A075B6T7 132 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 OR5H1A6NKK0 313 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 CD160O95971 181 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 IGHV3-11P01762 117 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 EIF2S2P20042 333 aaKnown RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 POLR2IP36954 125 aaKnown RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 HSDL1Q3SXM5 330 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 ZNF645Q8N7E2 425 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 OR6Q1Q8NGQ2 317 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 N4BP2L2Q92802 583 aaPredicted RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 PRRC1Q96M27 445 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 TEKT3Q9BXF9 490 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 FAM192AQ9GZU8 254 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 MYOZ1Q9NP98 299 aaPredicted RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 C21orf62Q9NYP8 219 aa2.78□□□□□ -1.96
CLK1-209ENST00000472679 RRP15Q9Y3B9 282 aaKnown RBP2.78□□□□□ -1.96
CLK1-209ENST00000472679 FHOD3Q2V2M9 1422 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 SYCE1LA8MT33 242 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 LSM8O95777 96 aaKnown RBP2.77□□□□□ -1.97
CLK1-209ENST00000472679 KRT14P02533 472 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 BMI1P35226 326 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 MRPL19P49406 292 aaKnown RBP2.77□□□□□ -1.97
CLK1-209ENST00000472679 NDUFA8P51970 172 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 C21orf59P57076 290 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 RGS8P57771 180 aaPredicted RBP2.77□□□□□ -1.97
CLK1-209ENST00000472679 ART3Q13508 389 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 GCSAMLQ5JQS6 135 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 SPANXA2-OT1Q8N9U9 137 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 FAM81AQ8TBF8 368 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 CDX2Q99626 313 aaPredicted RBP2.77□□□□□ -1.97
CLK1-209ENST00000472679 TMEM243Q9BU79 118 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 COMMD3-BMI1R4GMX3 469 aa2.77□□□□□ -1.97
CLK1-209ENST00000472679 UBN2Q6ZU65 1347 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 CCDC169A6NNP5 214 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 PDZK1P1A8MUH7 402 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 BTNL10A8MVZ5 291 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 GABRPO00591 440 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 POLR1CO15160 346 aaPredicted RBP2.76□□□□□ -1.97
CLK1-209ENST00000472679 UQCRFS1P47985 274 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 PRLHRP49683 370 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 TAS2R46P59540 309 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 RPS15P62841 145 aaKnown RBP2.76□□□□□ -1.97
CLK1-209ENST00000472679 SIGLEC14Q08ET2 396 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 IDI1Q13907 227 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 IGFBP7Q16270 282 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 TEX30Q5JUR7 227 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 GUSBP11Q6P575 273 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 TMEM220Q6QAJ8 160 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 SCD5Q86SK9 330 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 ZNF101Q8IZC7 436 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 TTC29Q8NA56 475 aaPredicted RBP2.76□□□□□ -1.97
CLK1-209ENST00000472679 OR5T1Q8NG75 326 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 OR10G6Q8NH81 332 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 C8orf44Q96CB5 159 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 XPO6Q96QU8 1125 aaKnown RBP2.76□□□□□ -1.97
CLK1-209ENST00000472679 CHP1Q99653 195 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 UCK2Q9BZX2 261 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 SLC7A5P2Q9GIP4 190 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 LYARQ9NX58 379 aaKnown RBP2.76□□□□□ -1.97
CLK1-209ENST00000472679 SLC39A1Q9NY26 324 aa2.76□□□□□ -1.97
CLK1-209ENST00000472679 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 A6NDN8 102 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 EIF1BO60739 113 aaKnown RBP2.75□□□□□ -1.97
CLK1-209ENST00000472679 CDH16O75309 829 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 SERPINB7O75635 380 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 CCNB2O95067 398 aa2.75□□□□□ -1.97
CLK1-209ENST00000472679 AGTP01019 485 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms