RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 MAGEB18Q96M61 343 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 ZNF583Q96ND8 569 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 ZNF582Q96NG8 517 aaPredicted RBP7.68□□□□□ -1.18
VCL-204ENST00000472585 WDFY2Q96P53 400 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 TRIM15Q9C019 465 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 UFSP2Q9NUQ7 469 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 ACOXLQ9NUZ1 547 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 NKIRAS1Q9NYS0 192 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 A0A087WUU8 490 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 TEX13CA0A0J9YWL9 993 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 ZNF816-ZNF321PA0A0X1KG74 233 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 A0A1B0GW55 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 PRSS37A4D1T9 235 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 GMNCA6NCL1 334 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 BTBD17A6NE02 478 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 P2RY10O00398 339 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 ENSAO43768 121 aaKnown RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 PTP4A3O75365 173 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 MPIG6BO95866 241 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L2P0CJ85 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L3P0CJ86 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L4P0CJ87 422 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L5P0CJ88 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L6P0CJ89 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L7P0CJ90 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 FPR3P25089 353 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 GUCA1AP43080 201 aaPredicted RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 DLX1P56177 255 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 FXYD6P3P58550 94 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 NFYCQ13952 458 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 GK2Q14410 553 aaPredicted RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 HERPUD1Q15011 391 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 CORO6Q6QEF8 472 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4L9Q6RFH8 374 aaPredicted RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 PTCHD4Q6ZW05 846 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 LDLRAD3Q86YD5 345 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 SCCPDHQ8NBX0 429 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 FNDC8Q8TC99 324 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 LHX4Q969G2 390 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 RASD2Q96D21 266 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 HSH2DQ96JZ2 352 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 TSSK2Q96PF2 358 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 WACQ9BTA9 647 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 POLR2J2Q9GZM3 115 aaKnown RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 POLR2J3Q9H1A7 115 aaKnown RBP7.67□□□□□ -1.18
VCL-204ENST00000472585 SYT4Q9H2B2 425 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DUX4Q9UBX2 424 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 LHFPL6Q9Y693 200 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
VCL-204ENST00000472585 A6NIZ1 184 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 EFCAB9A8MZ26 197 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 ANGPT2O15123 496 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 SLC16A7O60669 478 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 TSPAN9O75954 239 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 CD14P08571 375 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 NR2C1P13056 603 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 CD200P41217 278 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 CDKN2AP42771 156 aaKnown RBP7.66□□□□□ -1.18
VCL-204ENST00000472585 SLC9A3P48764 834 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 RAP1BP61224 184 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 LSM6P62312 80 aaKnown RBP7.66□□□□□ -1.18
VCL-204ENST00000472585 RAP1AP62834 184 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 AQP6Q13520 282 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 KCNMB1Q16558 191 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 CYBRD1Q53TN4 286 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 DEFB121Q5J5C9 76 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 ZNF826PQ6ZT77 177 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 OAFQ86UD1 273 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 GALNT4Q8N4A0 578 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 OR4S1Q8NGB4 309 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 PPP1R35Q8TAP8 253 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 RASSF5Q8WWW0 418 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 PRRC1Q96M27 445 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 ECSITQ9BQ95 431 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 NUAK2Q9H093 628 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 TMEM100Q9NV29 134 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 ADA2Q9NZK5 511 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 BAG5Q9UL15 447 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 SIGLEC9Q9Y336 463 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 FAM96BQ9Y3D0 163 aa7.66□□□□□ -1.18
VCL-204ENST00000472585 ANKRD61A6NGH8 418 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 LRRC30A6NM36 301 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 J3QW42 95 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 OR10H3O60404 316 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 PTBP3O95758 552 aaKnown RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 LHBP01229 141 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 KDELR2P33947 212 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 TGFBR2P37173 567 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 GPR4P46093 362 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 ST3GAL3Q11203 375 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 SLC35E4Q6ICL7 350 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 CCBE1Q6UXH8 406 aaPredicted RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 TMPRSS11FQ6ZWK6 438 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 BTN2A1Q7KYR7 527 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 VTCN1Q7Z7D3 282 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.65□□□□□ -1.18
VCL-204ENST00000472585 CROCCP2Q86T23 111 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 GLB1L2Q8IW92 636 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 PNKDQ8N490 385 aa7.65□□□□□ -1.18
VCL-204ENST00000472585 C11orf44Q8N8P7 122 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms