RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TIGD6Q17RP2 521 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 KRTAP27-1Q3LI81 207 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 CCDC58Q4VC31 144 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 ZNF684Q5T5D7 378 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 OR2G6Q5TZ20 316 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 RGS7BPQ6MZT1 257 aaPredicted RBP14.57□□□□□ -0.08
CCM2-205ENST00000472223 COMMD2Q86X83 199 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 NUP37Q8NFH4 326 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 C1QTNF5Q9BXJ0 243 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 ISG20L2Q9H9L3 353 aaKnown RBP14.57□□□□□ -0.08
CCM2-205ENST00000472223 ZNF391Q9UJN7 358 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 OR52A1Q9UKL2 312 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 TENM4Q6N022 2769 aa14.57□□□□□ -0.08
CCM2-205ENST00000472223 SMPD2O60906 423 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 SLC2A1P11166 492 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 GLRXP35754 106 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 PPP1CBP62140 327 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 SPHARQ15513 63 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 RSPO1Q2MKA7 263 aaPredicted RBP14.56□□□□□ -0.08
CCM2-205ENST00000472223 ZNF718Q3SXZ3 478 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 RPL22L1Q6P5R6 122 aaKnown RBP14.56□□□□□ -0.08
CCM2-205ENST00000472223 VHLLQ6RSH7 139 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 ZNF704Q6ZNC4 412 aaPredicted RBP14.56□□□□□ -0.08
CCM2-205ENST00000472223 NAA40Q86UY6 237 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 KLBQ86Z14 1044 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 PAQR4Q8N4S7 273 aaPredicted RBP14.56□□□□□ -0.08
CCM2-205ENST00000472223 FCGR1BQ92637 280 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 AKAP1Q92667 903 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCM2-205ENST00000472223 PELI1Q96FA3 418 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 SIGLEC11Q96RL6 698 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 PBOV1Q9GZY1 135 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 COMMD4Q9H0A8 199 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 RGCCQ9H4X1 137 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 OPA3Q9H6K4 179 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 ZNF696Q9H7X3 374 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 CMAHPQ9Y471 501 aa14.56□□□□□ -0.08
CCM2-205ENST00000472223 TRBV2A0A0J9YWF9 115 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 MAGEA13PA6NCF6 341 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 PRR32B1ATL7 298 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 ICMTO60725 284 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 HSMCR30P0CW71 290 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 PSMB10P40306 273 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 TGM4P49221 684 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 CDH15P55291 814 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 TBCEQ15813 527 aaPredicted RBP14.55□□□□□ -0.08
CCM2-205ENST00000472223 MOGQ16653 247 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 GFOD2Q3B7J2 385 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 MRPL21Q7Z2W9 205 aaKnown RBP14.55□□□□□ -0.08
CCM2-205ENST00000472223 SPARTQ8N0X7 666 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 SGCDQ92629 289 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 RORBQ92753 470 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 ZNF649Q9BS31 505 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 CA10Q9NS85 328 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 FAIMQ9NVQ4 179 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 FAM206AQ9NX38 181 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 CISD1Q9NZ45 108 aaKnown RBP14.55□□□□□ -0.08
CCM2-205ENST00000472223 GPR160Q9UJ42 338 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 PRR14LQ5THK1 2151 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 ADGRG4Q8IZF6 3080 aa14.55□□□□□ -0.08
CCM2-205ENST00000472223 GCN1Q92616 2671 aaKnown RBP14.54□□□□□ -0.08
CCM2-205ENST00000472223 H3BSA7 217 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 MTRF1O75570 445 aaKnown RBP14.54□□□□□ -0.08
CCM2-205ENST00000472223 NGFP01138 241 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 SELEP16581 610 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 WNT5AP41221 380 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 FABP6P51161 128 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 CCR9P51686 369 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 HGFACQ04756 655 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 SPOCK1Q08629 439 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ALKBH1Q13686 389 aaKnown RBP14.54□□□□□ -0.08
CCM2-205ENST00000472223 IRF3Q14653 427 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ZNF672Q499Z4 452 aaPredicted RBP14.54□□□□□ -0.08
CCM2-205ENST00000472223 FDX2Q6P4F2 183 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 COLCA1Q6ZS62 124 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 PGAP1Q75T13 922 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ZNF367Q7RTV3 350 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 TMEM200AQ86VY9 491 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ZNF101Q8IZC7 436 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ZNF676Q8N7Q3 588 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 KBTBD8Q8NFY9 601 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 SYNPRQ8TBG9 265 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 ACOT13Q9NPJ3 140 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 PTTG3PQ9NZH4 202 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 NUFIP1Q9UHK0 495 aaKnown RBP14.54□□□□□ -0.08
CCM2-205ENST00000472223 STARD10Q9Y365 291 aa14.54□□□□□ -0.08
CCM2-205ENST00000472223 A0A1B0GVI7 797 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 SHISA9B4DS77 424 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 UBCP0CG48 685 aaKnown RBP14.53□□□□□ -0.08
CCM2-205ENST00000472223 ZNF12P17014 697 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 SSTR2P30874 369 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 APOBEC3AP31941 199 aaPredicted RBP14.53□□□□□ -0.08
CCM2-205ENST00000472223 MAP2K4P45985 399 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 BDH1Q02338 343 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 EMX1Q04741 257 aaPredicted RBP14.53□□□□□ -0.08
CCM2-205ENST00000472223 TMEM244Q5VVB8 128 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 RFPL4BQ6ZWI9 263 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 FBXL14Q8N1E6 418 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 OR8B12Q8NGG6 310 aa14.53□□□□□ -0.08
CCM2-205ENST00000472223 OR2G2Q8NGZ5 317 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms