RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 SETD9Q8NE22 299 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 OR51G2Q8NGK0 314 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 RHOXF1Q8NHV9 184 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 MROQ9BYG7 248 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 VCX3BQ9H321 246 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 OPA3Q9H6K4 179 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 MYEF2Q9P2K5 600 aaKnown RBP12.94□□□□□ -0.34
SNX13-205ENST00000471744 MED13LQ71F56 2210 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 XRCC2O43543 280 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 TIMM8AO60220 97 aaPredicted RBP12.93□□□□□ -0.34
SNX13-205ENST00000471744 ENTPD6O75354 484 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 OR2T7P0C7T2 308 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 GABRB1P18505 474 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 DCTDP32321 178 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 ALDH3B1P43353 468 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 MTNR1AP48039 350 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 CX3CR1P49238 355 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 ROM1Q03395 351 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 PSG7Q13046 419 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 IL18R1Q13478 541 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 RIPK1Q13546 671 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 PCGF3Q3KNV8 242 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 SPATC1Q76KD6 591 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 ENTHD1Q8IYW4 607 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 OR52H1Q8NGJ2 320 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 OR2T27Q8NH04 317 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 CYGBQ8WWM9 190 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 UBE2FQ969M7 185 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 CMBLQ96DG6 245 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 SORCS2Q96PQ0 1159 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 DIRC2Q96SL1 478 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 AMELYQ99218 206 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 NKIRAS2Q9NYR9 191 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 PTTG3PQ9NZH4 202 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 NKX1-2Q9UD57 310 aaPredicted RBP12.93□□□□□ -0.34
SNX13-205ENST00000471744 PURGQ9UJV8 347 aaKnown RBP12.93□□□□□ -0.34
SNX13-205ENST00000471744 PCDHGB1Q9Y5G3 927 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 F8P00451 2351 aa12.93□□□□□ -0.34
SNX13-205ENST00000471744 ACOD1A6NK06 481 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 C17orf100A8MU93 164 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 H0YAE9 185 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 H0YJX3 145 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 NDUFS7O75251 213 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 ANXA2P07355 339 aaKnown RBP12.92□□□□□ -0.34
SNX13-205ENST00000471744 CFL1P23528 166 aaKnown RBP12.92□□□□□ -0.34
SNX13-205ENST00000471744 EGR3Q06889 387 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 MAD2L1BPQ15013 274 aaPredicted RBP12.92□□□□□ -0.34
SNX13-205ENST00000471744 FAM209AQ5JX71 171 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 CLEC2AQ6UVW9 174 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 TGIF2LYQ8IUE0 185 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 KRTAP1-3Q8IUG1 177 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
SNX13-205ENST00000471744 ADI1Q9BV57 179 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 POFUT1Q9H488 388 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 ZDHHC8Q9ULC8 765 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 KLHDC2Q9Y2U9 406 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 HSPE1-MOB4S4R3N1 261 aa12.92□□□□□ -0.34
SNX13-205ENST00000471744 SSX4O60224 188 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ADH4P08319 380 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 CAPGP40121 348 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF81P51508 661 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 MMP15P51511 669 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 RIDAP52758 137 aaKnown RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 HCCSP53701 268 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF121P58317 390 aaPredicted RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 PSMA6P60900 246 aaKnown RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 CXCR4P61073 352 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ACTC1P68032 377 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ACTA1P68133 377 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ADARB1P78563 741 aaKnown RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 IL5RAQ01344 420 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 CLEC12BQ2HXU8 276 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF829Q3KNS6 432 aaPredicted RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF691Q5VV52 312 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 LRRN1Q6UXK5 716 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 PGAP1Q75T13 922 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 MRPL21Q7Z2W9 205 aaKnown RBP12.91□□□□□ -0.34
SNX13-205ENST00000471744 NAA40Q86UY6 237 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 OR10A2Q9H208 303 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 RGCCQ9H4X1 137 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 ZNF391Q9UJN7 358 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 IKZF2Q9UKS7 526 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 COPS3Q9UNS2 423 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 LRP12Q9Y561 859 aa12.91□□□□□ -0.34
SNX13-205ENST00000471744 IQCF6A8MYZ5 107 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 NAT2P11245 290 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 TNFSF4P23510 183 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 PDLIM4P50479 330 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
SNX13-205ENST00000471744 SNAI3Q3KNW1 292 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 ALKBH6Q3KRA9 238 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 WFDC11Q8NEX6 87 aa12.9□□□□□ -0.34
SNX13-205ENST00000471744 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms