RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 TMEM9BQ9NQ34 198 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 TAS2R5Q9NYW4 299 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 MTCH1Q9NZJ7 389 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 CTNNA3Q9UI47 895 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 PTBP2Q9UKA9 531 aaKnown RBP0.43□□□□□ -2.34
COMMD3-209ENST00000471350 IKZF2Q9UKS7 526 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 SNX6Q9UNH7 406 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 CHTOPQ9Y3Y2 248 aaKnown RBP0.43□□□□□ -2.34
COMMD3-209ENST00000471350 TRIP11Q15643 1979 aa0.43□□□□□ -2.34
COMMD3-209ENST00000471350 VWDEQ8N2E2 1590 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 SSH2Q76I76 1423 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 IGKV1-8A0A0C4DH67 115 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 A0A0J9YXV3 536 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 A0A1B0GVL5 298 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TIMM8AO60220 97 aaPredicted RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 KLHL41O60662 606 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 CDS2O95674 445 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TMEM50AO95807 157 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TSPAN12O95859 305 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 NRASP01111 189 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 HRASP01112 189 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 KRASP01116 189 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 MAS1P04201 325 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 P0DMU3 169 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 FAM231AP0DMU4 169 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 FAM231CP0DMU5 169 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TROVE2P10155 538 aaKnown RBP eCLIP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 PRKACBP22694 351 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 PCK1P35558 622 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TGM4P49221 684 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 PRR3P79522 188 aaKnown RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 CCDC184Q52MB2 194 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 CCDC92Q53HC0 331 aaPredicted RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 UBE2UQ5VVX9 321 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 KCTD16Q68DU8 428 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TTC19Q6DKK2 380 aaPredicted RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 UQCC3Q6UW78 93 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 EFL1Q7Z2Z2 1120 aaKnown RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 CBR4Q8N4T8 237 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 ZFP41Q8N8Y5 198 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 OR4C13Q8NGP0 309 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 OR1S2Q8NGQ3 325 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 OR1L1Q8NH94 360 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 RAB3IL1Q8TBN0 382 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 SLC7A13Q8TCU3 470 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TCEANC2Q96MN5 208 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TMEM43Q9BTV4 400 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 TOLLIPQ9H0E2 274 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 DYRK4Q9NR20 520 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 FBXO8Q9NRD0 319 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 CLN8Q9UBY8 286 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 MTFP1Q9UDX5 166 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 DDX19BQ9UMR2 479 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 LRRC42Q9Y546 428 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 SLC22A7Q9Y694 548 aa0.42□□□□□ -2.34
COMMD3-209ENST00000471350 PRRC2BQ5JSZ5 2229 aaKnown RBP0.42□□□□□ -2.34
COMMD3-209ENST00000471350 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
COMMD3-209ENST00000471350 CAMTA1Q9Y6Y1 1673 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 SMIM26A0A096LP01 95 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 TRGV4A0A0C4DH28 118 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 CLRN2A0PK11 232 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 ISPDA4D126 451 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 SNTNA6NMZ2 147 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 LYRM9A8MSI8 78 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 SYCE1LA8MT33 242 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 PDZK1P1A8MUH7 402 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 K7EMT4 169 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 MAGEB3O15480 346 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 FKBP6O75344 327 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 CLPXO76031 633 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 IFNB1P01574 187 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 IGHV1-46P01743 117 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 IGHG2P01859 326 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 IQCF3P0C7M6 154 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 CMC4P56277 68 aaPredicted RBP0.41□□□□□ -2.34
COMMD3-209ENST00000471350 IFITM3Q01628 133 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 PDK3Q15120 406 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 ZNF322Q6U7Q0 402 aaPredicted RBP0.41□□□□□ -2.34
COMMD3-209ENST00000471350 NPWQ8N729 165 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 UBAC2Q8NBM4 344 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 OR1L6Q8NGR2 347 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 OR1L4Q8NGR5 311 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 ZNF420Q8TAQ5 688 aaPredicted RBP0.41□□□□□ -2.34
COMMD3-209ENST00000471350 GPR151Q8TDV0 419 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 CCDC126Q96EE4 140 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 TMEM243Q9BU79 118 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 HIGD2AQ9BW72 106 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 SAMD10Q9BYL1 202 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 RMND5AQ9H871 391 aa0.41□□□□□ -2.34
COMMD3-209ENST00000471350 RPRD2Q5VT52 1461 aaKnown RBP0.41□□□□□ -2.34
COMMD3-209ENST00000471350 MYBPHLA2RUH7 354 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 ANGPT2O15123 496 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 SERPINB7O75635 380 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 KCNK2O95069 426 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 SERPINA5P05154 406 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 SERPIND1P05546 499 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 SLC35G6P0C7Q6 338 aa0.4□□□□□ -2.35
COMMD3-209ENST00000471350 ATP1B2P14415 290 aaPredicted RBP0.4□□□□□ -2.35
COMMD3-209ENST00000471350 CTRB1P17538 263 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms