RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 MST1LQ2TV78 715 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 ALKBH6Q3KRA9 238 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF529Q6P280 563 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 SLC16A12Q6ZSM3 486 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 OR10H5Q8NGA6 315 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 OR13C5Q8NGS8 318 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 MARS2Q96GW9 593 aaKnown RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 DACH2Q96NX9 599 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 MGLLQ99685 303 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 DOK1Q99704 481 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 CDADC1Q9BWV3 514 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 PBOV1Q9GZY1 135 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 CENPMQ9NSP4 180 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 NUFIP1Q9UHK0 495 aaKnown RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 KLF2Q9Y5W3 355 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
SF3A1-207ENST00000471342 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
SF3A1-207ENST00000471342 hCG_38984A0A1B0GV85 526 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 M0R135 149 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 PHYHO14832 338 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 GPRIN2O60269 458 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 GPX5O75715 221 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 MT-ND5P03915 603 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ISG15P05161 165 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ATP6V1B1P15313 513 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 PPP3CBP16298 524 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 NR4A1P22736 598 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 HTR5AP47898 357 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 CX3CR1P49238 355 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 PRSS12P56730 875 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF92Q03936 586 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ALKBH1Q13686 389 aaKnown RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 BLMHQ13867 455 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 GLYATL3Q5SZD4 288 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 DRAM2Q6UX65 266 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF367Q7RTV3 350 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 KLHL36Q8N4N3 616 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 SLC30A7Q8NEW0 376 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 OR2AJ1Q8NGZ0 328 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 OR14K1Q8NGZ2 314 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 SSC4DQ8WTU2 575 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 TMEM171Q8WVE6 324 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 GHSRQ92847 366 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ZNF799Q96GE5 643 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 PDCD1LG2Q9BQ51 273 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 MRPS26Q9BYN8 205 aaKnown RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 TBCCD1Q9NVR7 557 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 GNG8Q9UK08 70 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 BLOC1S6Q9UL45 172 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 V9GYS6 101 aa8.5□□□□□ -1.05
SF3A1-207ENST00000471342 ANKHD1Q8IWZ3 2542 aaKnown RBP8.5□□□□□ -1.05
SF3A1-207ENST00000471342 TRBV5-7A0A0A0MS05 114 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 TMEM269A0A1B0GVZ9 245 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 C5orf49A4QMS7 147 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ACOD1A6NK06 481 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 E7EQL1 145 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ATP6V1G2-DDX39BF2Z307 99 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 F5H5K5 113 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RPP14O95059 124 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 H2BFMP0C1H6 154 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 EEF1B2P24534 225 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ATP6V1E1P36543 226 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 MPV17P39210 176 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RGS6P49758 472 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RIDAP52758 137 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 UCP2P55851 309 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 UBE2NP61088 152 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RPS25P62851 125 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 GRB2P62993 217 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 FAM3AP98173 230 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 FABP5Q01469 135 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 BSPH1Q075Z2 132 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ECH1Q13011 328 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 GPR50Q13585 617 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 CCDC58Q4VC31 144 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 TMEM42Q69YG0 159 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RPL22L1Q6P5R6 122 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 KCTD18Q6PI47 426 aaPredicted RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 KRT77Q7Z794 578 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 LRP11Q86VZ4 500 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 NR2C2APQ86WQ0 139 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 OR2AE1Q8NHA4 323 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 SNX33Q8WV41 574 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RPL3LQ92901 407 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ORAI1Q96D31 301 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 SMIM19Q96E16 107 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 ZC3HAV1LQ96H79 300 aaKnown RBP8.49□□□□□ -1.05
SF3A1-207ENST00000471342 GFI1Q99684 422 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 SPOCK3Q9BQ16 436 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 SLC30A2Q9BRI3 323 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 MND1Q9BWT6 205 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 MROQ9BYG7 248 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 NIPAL2Q9H841 368 aa8.49□□□□□ -1.05
SF3A1-207ENST00000471342 RNF121Q9H920 327 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms