RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OR51A7Q8NH64 312 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 OR2AE1Q8NHA4 323 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 NIPSNAP1Q9BPW8 284 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 REEP4Q9H6H4 257 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 VNN3Q9NY84 501 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 COPS3Q9UNS2 423 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 SNX24Q9Y343 169 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 MTCH2Q9Y6C9 303 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 USH1CQ9Y6N9 552 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 MROH7Q68CQ1 1323 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 EIF3AQ14152 1382 aaKnown RBP3.65□□□□□ -1.82
PRPF40A-206ENST00000471167 TNRQ92752 1358 aa3.65□□□□□ -1.82
PRPF40A-206ENST00000471167 KIR2DS1A0A191URI9 304 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 A0A1B0GW55 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OR5H15A6NDH6 313 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OR5B21A6NL26 309 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 IDSB3KWA1 339 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TRDCB7Z8K6 153 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TCP10L2B9ZVM9 353 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 F5H5T6 163 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DFFAO00273 331 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FCN1O00602 326 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FGF16O43320 207 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 MPZL2O60487 215 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CLDN11O75508 207 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CTDNEP1O95476 244 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 SNAP29O95721 258 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 LSM8O95777 96 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 HLA-AP01891 365 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CATP04040 527 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 SERPINA5P05154 406 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TACSTD2P09758 323 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ACSM4P0C7M7 580 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L2P0CJ85 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L3P0CJ86 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L5P0CJ88 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L6P0CJ89 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L7P0CJ90 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 THRAP10827 490 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 UCHL3P15374 230 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CSNK2A2P19784 350 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FGF9P31371 208 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 SAA4P35542 130 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 YAP1P46937 504 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ERFP50548 548 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CDK9P50750 372 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 RPL31P62899 125 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FAM3AP98173 230 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 NDPQ00604 133 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF33BQ06732 778 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DYNC1I2Q13409 638 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OR5I1Q13606 314 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 SMCO1Q147U7 214 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 KIR2DS1Q14954 304 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OXA1LQ15070 435 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM176BQ3YBM2 270 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 PRR30Q53SZ7 412 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FAM45BPQ6NSW5 357 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF530Q6P9A1 599 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4L9Q6RFH8 374 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 MRPL52Q86TS9 123 aaKnown RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 STK40Q8N2I9 435 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 EID2Q8N6I1 236 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 PXT1Q8NFP0 134 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OR9A4Q8NGU2 314 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 OR5P2Q8WZ92 322 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 RMND5BQ96G75 393 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF670Q9BS34 389 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 NUDT9Q9BW91 350 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM59Q9BXS4 323 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 RBKSQ9H477 322 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 UBE2ZQ9H832 354 aaPredicted RBP3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 RDH14Q9HBH5 336 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 FBXO8Q9NRD0 319 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 PARVAQ9NVD7 372 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 CMTM6Q9NX76 183 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM9Q9P0T7 183 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 DUX4Q9UBX2 424 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 RSPH14Q9UHP6 348 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 ARL5AQ9Y689 179 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
PRPF40A-206ENST00000471167 MTUS2Q5JR59 1369 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 PLEKHH1Q9ULM0 1364 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 KIR2DL5BA0A0G2JN68 375 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 KIR2DL5BA0A0G2JPC4 375 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 GJE1A6NN92 205 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 C21orf140B9A014 251 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 K7ERI5 159 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 KPNA3O00505 521 aaPredicted RBP3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 CTNSO60931 367 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 GLSO94925 669 aaPredicted RBP3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 ISG15P05161 165 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 CCDC166P0CW27 439 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 UGT2B7P16662 529 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 CD36P16671 472 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 PVALBP20472 110 aaPredicted RBP3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 COX5AP20674 150 aa3.64□□□□□ -1.83
PRPF40A-206ENST00000471167 CLDN12P56749 244 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms