RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 EEF1E1O43324 174 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 PFDN1O60925 122 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 LYZL6O75951 148 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 KRT33AO76009 404 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 CDK1P06493 297 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 RNF224P0DH78 156 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 COX5AP20674 150 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MPGP29372 298 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 CCKARP32238 428 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 OPRM1P35372 400 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 CENPAP49450 140 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 CASP6P55212 293 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SH3BGRP55822 239 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MRPS34P82930 218 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ARF1P84077 181 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 GLO1Q04760 184 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 FAM27E3Q08E93 113 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ENDOGQ14249 297 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 HSPB2Q16082 182 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 PCK2Q16822 640 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SLC35D3Q5M8T2 416 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 CORO6Q6QEF8 472 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 STAC2Q6ZMT1 411 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF627Q7L945 461 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SSX6Q7RTT6 188 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 DPY19L4Q7Z388 723 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ZGRF1Q86YA3 2104 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ERI1Q8IV48 349 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SKA3Q8IX90 412 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 LRRC18Q8N456 261 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 OR52I1Q8NGK6 324 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 FNDC8Q8TC99 324 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 RFKQ969G6 155 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 YIPF6Q96EC8 236 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 FBXO17Q96EF6 278 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 RNFT2Q96EX2 444 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 Q96MT0 163 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 DOK1Q99704 481 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MRI1Q9BV20 369 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF416Q9BWM5 594 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 TTTY10Q9BZA0 68 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MEGF9Q9H1U4 602 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 ZMAT3Q9HA38 289 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 NOX3Q9HBY0 568 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 POLE4Q9NR33 117 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 TMEM38BQ9NVV0 291 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 RHBDL2Q9NX52 303 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SCN3BQ9NY72 215 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 NDUFA13Q9P0J0 144 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 SLC23A1Q9UHI7 598 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 KCNG2Q9UJ96 466 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 PROCRQ9UNN8 238 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MOKQ9UQ07 419 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 EXOGQ9Y2C4 368 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 KLHDC2Q9Y2U9 406 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 TPRKBQ9Y3C4 175 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 RPL36Q9Y3U8 105 aaKnown RBP4.12□□□□□ -1.75
SF3B1-208ENST00000470268 LHFPL6Q9Y693 200 aa4.12□□□□□ -1.75
SF3B1-208ENST00000470268 MED12LQ86YW9 2145 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 A0A1W2PQL4 384 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 A0A1W2PR80 420 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR6C65A6NJZ3 312 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF593O00488 134 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 RER1O15258 196 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZG16O60844 167 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 RAD51DO75771 328 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 HNRNPCP07910 306 aaKnown RBP eCLIP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 GADD45AP24522 165 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ENTPD1P49961 510 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TUBA1BP68363 451 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF85Q03923 595 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SRSF1Q07955 248 aaKnown RBP eCLIP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 RAB40BQ12829 278 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 GABRA6Q16445 453 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SGCAQ16586 387 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 HIKESHIQ53FT3 197 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TMEM211Q6ICI0 200 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 DNM1P34Q6PK57 102 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF813Q6ZN06 617 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CFAP77Q6ZQR2 320 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 PRSS48Q7RTY5 328 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 MRGPRGQ86SM5 289 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 CDC20BQ86Y33 519 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SNX29P2Q8IUI4 249 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 LINC00346Q8IVM7 164 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 STX19Q8N4C7 294 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 SLC22A24Q8N4F4 322 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF433Q8N7K0 673 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR1K1Q8NGR3 316 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 OR6N2Q8NGY6 317 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 RORBQ92753 470 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 BCL2L2Q92843 193 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TRMT61AQ96FX7 289 aaKnown RBP4.11□□□□□ -1.75
SF3B1-208ENST00000470268 INTS14Q96SY0 518 aa4.11□□□□□ -1.75
SF3B1-208ENST00000470268 TBX5Q99593 518 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms