RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C5orf63A6NC05 138 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 E9PLN8 166 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 IGFBP3P17936 291 aaPredicted RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 SFRP5Q5T4F7 317 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 DCDC5Q6ZRR9 648 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 GCNT2Q8N0V5 402 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 GDPD1Q8N9F7 314 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 PLPP7Q8NBV4 271 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 OR51A2Q8NGJ7 313 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 OR1J2Q8NGS2 313 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 OR1F12Q8NHA8 337 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 FAM71F1Q96KD3 344 aaPredicted RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 PPP1R3EQ9H7J1 279 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 DMXL2Q8TDJ6 3036 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 SVILO95425 2214 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 SPENQ96T58 3664 aaKnown RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 APOC1P02654 83 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 CRYGSP22914 178 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 GNALP38405 381 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 HTR5AP47898 357 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 STK11Q15831 433 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 TRIM16LQ309B1 348 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 PLEKHN1Q494U1 663 aaPredicted RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 POC5Q8NA72 575 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 ADAT3Q96EY9 351 aaPredicted RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 NKX3-1Q99801 234 aaPredicted RBP15.87■□□□□ 0.13
SMC4-211ENST00000469858 WNT5BQ9H1J7 359 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 SLC17A5Q9NRA2 495 aa15.87■□□□□ 0.13
SMC4-211ENST00000469858 A0A0G2JMP0 313 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 A0A0X1KG70 313 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 SS18L1O75177 396 aaPredicted RBP15.86■□□□□ 0.13
SMC4-211ENST00000469858 TMEM127O75204 238 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 APOA1P02647 267 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 MMP7P09237 267 aaPredicted RBP15.86■□□□□ 0.13
SMC4-211ENST00000469858 IL7P13232 177 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 SPOCK1Q08629 439 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 ECH1Q13011 328 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 OR4M2Q8NGB6 313 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 EXTL1Q92935 676 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 DOCK7Q96N67 2140 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 RNF121Q9H920 327 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 TP53TG5Q9Y2B4 290 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 PRRC2CQ9Y520 2896 aaKnown RBP15.86■□□□□ 0.13
SMC4-211ENST00000469858 GTF3C1Q12789 2109 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 CEP295Q9C0D2 2601 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 OR6C6A6NF89 314 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 TBR1Q16650 682 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 UBE2NLQ5JXB2 153 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 Q6ZNX1 250 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 SERPINA12Q8IW75 414 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 GLRX2Q9NS18 164 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 ZNF224Q9NZL3 707 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 OR5V1Q9UGF6 321 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 STEAP1Q9UHE8 339 aa15.86■□□□□ 0.13
SMC4-211ENST00000469858 BOD1L1Q8NFC6 3051 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 MAGEB3O15480 346 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 ITGA5P08648 1049 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 CSF3P09919 207 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 CALCBP10092 127 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 ZNF20P17024 532 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 CCL1P22362 96 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 PTBP1P26599 531 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMC4-211ENST00000469858 OR3A2P47893 321 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 TPTEP56180 551 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 OXA1LQ15070 435 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 SLC36A2Q495M3 483 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 RPUSD3Q6P087 351 aaKnown RBP15.85■□□□□ 0.13
SMC4-211ENST00000469858 DOK3Q7L591 496 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 Q8N402 240 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 MRI1Q9BV20 369 aa15.85■□□□□ 0.13
SMC4-211ENST00000469858 ANKRD11Q6UB99 2663 aaPredicted RBP15.84■□□□□ 0.13
SMC4-211ENST00000469858 TTLL8A6PVC2 850 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 OCMP0CE72 109 aaPredicted RBP15.84■□□□□ 0.13
SMC4-211ENST00000469858 ABOP16442 354 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 HGFACQ04756 655 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 SNAI3Q3KNW1 292 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 PABPC1L2AQ5JQF8 200 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 GLT8D1Q68CQ7 371 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 ZNF585AQ6P3V2 769 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 DRAM2Q6UX65 266 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 ZNF627Q7L945 461 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 LYZL4Q96KX0 146 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 WACQ9BTA9 647 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 PLEKHA1Q9HB21 404 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 A0A0U1RQV5 110 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 A0A1W2PQ09 198 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 OR14I1A6ND48 311 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 HLA-HP01893 362 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 CRYABP02511 175 aaKnown RBP15.84■□□□□ 0.13
SMC4-211ENST00000469858 ADRB1P08588 477 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 PITPNBP48739 271 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 DEFA1P59665 94 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 DEFA3P59666 94 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 RIN1Q13671 783 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 TAB1Q15750 504 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 ACSF3Q4G176 576 aaPredicted RBP15.84■□□□□ 0.13
SMC4-211ENST00000469858 CMTM4Q8IZR5 234 aa15.84■□□□□ 0.13
SMC4-211ENST00000469858 C9orf106Q8NAJ2 232 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms