RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CD1EP15812 388 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 NPR2P20594 1047 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 GSTM3P21266 225 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 PAICSP22234 425 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 SLC6A6P31641 620 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 F2RL1P55085 397 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 RPS23P62266 143 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ARF1P84077 181 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 HSF2Q03933 536 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 EGR4Q05215 589 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ZP4Q12836 540 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 CAMK2DQ13557 499 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 SNTB1Q13884 538 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 GUSBP1Q15486 140 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 EFNB3Q15768 340 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 SLC36A2Q495M3 483 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ZBED5Q49AG3 693 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 GPR139Q6DWJ6 353 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 LCN8Q6JVE9 175 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 PIWIL3Q7Z3Z3 882 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 HAPLN4Q86UW8 402 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 RBM45Q8IUH3 476 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 AQP12AQ8IXF9 295 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 NRMQ8IXM6 262 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 GABRG1Q8N1C3 465 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 FBXL14Q8N1E6 418 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF433Q8N7K0 673 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 OR1J2Q8NGS2 313 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 OR52N5Q8NH56 324 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 OR51A7Q8NH64 312 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 OR6X1Q8NH79 312 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 FANK1Q8TC84 345 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 GNPDA2Q8TDQ7 276 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 STMN2Q93045 179 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 PLEKHA8Q96JA3 519 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 LURAP1Q96LR2 239 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 CCL19Q99731 98 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 KLHDC3Q9BQ90 382 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 C1orf198Q9H425 327 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 CRLF2Q9HC73 371 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 SAMHD1Q9Y3Z3 626 aaKnown RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 TNFRSF18Q9Y5U5 241 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 LYVE1Q9Y5Y7 322 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 INTS1Q8N201 2190 aaKnown RBP5.4□□□□□ -1.55
PTCD3-208ENST00000469585 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
PTCD3-208ENST00000469585 ICE1Q9Y2F5 2266 aa5.4□□□□□ -1.55
PTCD3-208ENST00000469585 IGKV1D-42A0A075B6H8 117 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 FTCDNL1E5RQL4 147 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 AHCYL1O43865 530 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 SMPD2O60906 423 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 GCM2O75603 506 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 CTAG2O75638 210 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ASAH2BP0C7U1 165 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF182P17025 639 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 COX5AP20674 150 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ATP6V1B2P21281 511 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 IGHV1-2P23083 117 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 CRABP1P29762 137 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ARR3P36575 388 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ACVR1BP36896 505 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 GPR4P46093 362 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF83P51522 516 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 CDH11P55287 796 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 RPL27P61353 136 aaKnown RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 VLDLRP98155 873 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 PRKCDQ05655 676 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 RPL18Q07020 188 aaKnown RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 NPRL3Q12980 569 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 GSG1Q2KHT4 349 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 CEACAM16Q2WEN9 425 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 THEM4Q5T1C6 240 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 TSPO2Q5TGU0 170 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 AGAP6Q5VW22 663 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 OR2T5Q6IEZ7 315 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 SMARCD3Q6STE5 483 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF704Q6ZNC4 412 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ADCK1Q86TW2 530 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 NKAIN4Q8IVV8 208 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 KDM8Q8N371 416 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 NOXO1Q8NFA2 376 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 OR4K5Q8NGD3 323 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 OR2T29Q8NH02 315 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 PFN4Q8NHR9 129 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 TEX47Q8TBZ9 253 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 MAGEE2Q8TD90 523 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 DNAJC9Q8WXX5 260 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 TMEM68Q96MH6 324 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ZNF385AQ96PM9 386 aaKnown RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 OR2M2Q96R28 347 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 ALG12Q9BV10 488 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 TXNIPQ9H3M7 391 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 SLC7A10Q9NS82 523 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 MED29Q9NX70 200 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 TAS2R1Q9NYW7 299 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 GLTPQ9NZD2 209 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 EIF3KQ9UBQ5 218 aaKnown RBP5.39□□□□□ -1.55
PTCD3-208ENST00000469585 CD300AQ9UGN4 299 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 BAIAP2Q9UQB8 552 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 MED12LQ86YW9 2145 aa5.39□□□□□ -1.55
PTCD3-208ENST00000469585 MED12Q93074 2177 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms