RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 NOXO1Q8NFA2 376 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 OR4S1Q8NGB4 309 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 OR4D11Q8NGI4 311 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 OR14K1Q8NGZ2 314 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 MOSPD2Q8NHP6 518 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 ASB10Q8WXI3 467 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 LRTOMTQ8WZ04 291 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 TNFRSF14Q92956 283 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 SEH1LQ96EE3 360 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 OR52E6Q96RD3 313 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 SEPHS2Q99611 448 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 MMADHCQ9H3L0 296 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-209ENST00000469511 ZNF702PQ9H963 129 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 TPT1P8Q9HAU6 139 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 INPP5EQ9NRR6 644 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 MAN2C1Q9NTJ4 1040 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 C20orf141Q9NUB4 165 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 PTTG3PQ9NZH4 202 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 FAM96BQ9Y3D0 163 aa4.28□□□□□ -1.72
PTPN4-209ENST00000469511 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 BLOC1S5-TXNDC5H3BN57 136 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 M0R3H8 397 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 NPFFO15130 113 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 OR6A2O95222 327 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ABHD16AO95870 558 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 IGHG1P01857 330 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 GYPAP02724 150 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 FBP1P09467 338 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 CCDC159P0C7I6 412 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ASAH2BP0C7U1 165 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 SAA4P35542 130 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 AQP2P41181 271 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 RAD23AP54725 363 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 RPL18Q07020 188 aaKnown RBP4.27□□□□□ -1.73
PTPN4-209ENST00000469511 EGFEM1PQ0D2K5 195 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 GALEQ14376 348 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 TCTEX1D4Q5JR98 221 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ARMC4Q5T2S8 1044 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 FAM91A1Q658Y4 838 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ZFAND6Q6FIF0 208 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 HCP5Q6MZN7 132 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 C10orf99Q6UWK7 81 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 C5orf46Q6UWT4 87 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ADAMTSL5Q6ZMM2 481 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 OVCH2Q7RTZ1 564 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 DPPA2Q7Z7J5 298 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 NDUFA11Q86Y39 141 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 CMTM4Q8IZR5 234 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 PQLC1Q8N2U9 271 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 OR8G5Q8NG78 346 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 NFKBIDQ8NI38 313 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 MUC7Q8TAX7 377 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 DNAJA4Q8WW22 397 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-209ENST00000469511 PTP4A1Q93096 173 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 PKNOX2Q96KN3 472 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 NKX3-1Q99801 234 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-209ENST00000469511 SSX3Q99909 188 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 PRSS27Q9BQR3 290 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 TMEM43Q9BTV4 400 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ELOVL3Q9HB03 270 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 BCL2L10Q9HD36 194 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 MEPEQ9NQ76 525 aaPredicted RBP4.27□□□□□ -1.73
PTPN4-209ENST00000469511 TBCCD1Q9NVR7 557 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ADA2Q9NZK5 511 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 RPUSD1Q9UJJ7 312 aaKnown RBP4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ANGPT4Q9Y264 503 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 IFT52Q9Y366 437 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 RYR1P21817 5038 aa4.27□□□□□ -1.73
PTPN4-209ENST00000469511 ELOVL7A1L3X0 281 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 CPSF4LA6NMK7 179 aaKnown RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 DBX1A6NMT0 343 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 H3BSA7 217 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 H7C1C5 153 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 RFXANKO14593 260 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 DVL1O14640 695 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 IMPA2O14732 288 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 SURF4O15260 269 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 FSTL3O95633 263 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 KRT75O95678 551 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 AMY1AP04745 511 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 LIPFP07098 398 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 CHRM2P08172 466 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 CST2P09228 141 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 SELLP14151 372 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 ZNF26P17031 533 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 CPT2P23786 658 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 AQP1P29972 269 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 PRKAR1BP31321 381 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 CASQ1P31415 396 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 ANXA11P50995 505 aaKnown RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 RAB13P51153 203 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 BMXP51813 675 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 ARHGDIAP52565 204 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 RGS8P57771 180 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 LCN6P62502 163 aa4.26□□□□□ -1.73
PTPN4-209ENST00000469511 MAD2L1Q13257 205 aaPredicted RBP4.26□□□□□ -1.73
PTPN4-209ENST00000469511 RGNQ15493 299 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms