RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RPS23P62266 143 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SIRPAP78324 504 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ADAM8P78325 824 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IL13RA1P78552 427 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RPL19P84098 196 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PAX5Q02548 391 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IRF8Q02556 426 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 DHRS2Q13268 280 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 MADCAM1Q13477 382 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 LASP1Q14847 261 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ELOCQ15369 112 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ELOBQ15370 118 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM183BQ1AE95 376 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 MAJINQ3KP22 176 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF791Q3KP31 576 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PLEKHS1Q5SXH7 462 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 C9orf135Q5VTT2 229 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 EEF1DP3Q658K8 133 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NIPAL3Q6P499 406 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 UNQ6126/PRO20091Q6UXV3 157 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 FCRLAQ7L513 359 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PRSS45Q7RTY3 260 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TIPARPQ7Z3E1 657 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NUFIP2Q7Z417 695 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PRRT2Q7Z6L0 340 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TMED4Q7Z7H5 227 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 GGNQ86UU5 652 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TMEM173Q86WV6 379 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 APOBEC3FQ8IUX4 373 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 DND1Q8IYX4 353 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CLECL1Q8IZS7 167 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TTC9BQ8N6N2 239 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ZFP41Q8N8Y5 198 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SLC38A9Q8NBW4 561 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CLEC1AQ8NC01 280 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CHST13Q8NET6 341 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR4K14Q8NGD5 310 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR52E1Q8NGJ3 308 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OR9A1PQ8NGU1 263 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SFXN5Q8TD22 340 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RPS4Y2Q8TD47 263 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 TMED6Q8WW62 240 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ASB5Q8WWX0 329 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 AUTS2Q8WXX7 1259 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NDRG1Q92597 394 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 MAL2Q969L2 176 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SLC25A28Q96A46 364 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NTNG2Q96CW9 530 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 BPIFA2Q96DR5 249 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RBMXL1Q96E39 390 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ARSGQ96EG1 525 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 C16orf58Q96GQ5 468 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 BOD1Q96IK1 185 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SLC41A2Q96JW4 573 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PRAP1Q96NZ9 151 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CNN2Q99439 309 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SEMA3CQ99985 751 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NIPSNAP3BQ9BS92 247 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 EFCAB11Q9BUY7 163 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 EIF5A2Q9GZV4 153 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CSTL1Q9H114 145 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 WDR13Q9H1Z4 485 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SLC26A1Q9H2B4 701 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ADGRL4Q9HBW9 690 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 PDE7BQ9NP56 450 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CMC2Q9NRP2 79 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CYTL1Q9NRR1 136 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IL17CQ9P0M4 197 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 RHCGQ9UBD6 479 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 KLK11Q9UBX7 282 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IL19Q9UHD0 177 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 STEAP1Q9UHE8 339 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 IL17BQ9UHF5 180 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 OSGIN2Q9Y236 505 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 AMDHD2Q9Y303 409 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 CSAG2Q9Y5P2 127 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ARL5AQ9Y689 179 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 ZSWIM8A7E2V4 1837 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
SF3B1-207ENST00000468925 KIAA1217Q5T5P2 1943 aa4.36□□□□□ -1.71
SF3B1-207ENST00000468925 COL14A1Q05707 1796 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 PLXNA1Q9UIW2 1896 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SMCHD1A6NHR9 2005 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 A0A1W2PQ45 241 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 A0A1W2PQY0 241 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 C5orf51A6NDU8 294 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FAM183AA6NL82 134 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 YJEFN3A6XGL0 299 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FAM166BA8MTA8 275 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF736B4DX44 427 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 FTCDNL1E5RQL4 147 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 DCTN6O00399 190 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ZNF354AO60765 605 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 SOCS5O75159 536 aa4.35□□□□□ -1.71
SF3B1-207ENST00000468925 ERAL1O75616 437 aaKnown RBP4.35□□□□□ -1.71
SF3B1-207ENST00000468925 TNFSF15O95150 251 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms