RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ABOP16442 354 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 FSTP19883 344 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 PABPC1L2AQ5JQF8 200 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 CNIH2Q6PI25 160 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 DRAM2Q6UX65 266 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 SNX29P2Q8IUI4 249 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 DNAAF1Q8NEP3 725 aa16.59■□□□□ 0.25
SMC4-209ENST00000468653 MED12LQ86YW9 2145 aa16.58■□□□□ 0.25
SMC4-209ENST00000468653 MGAQ8IWI9 3026 aa16.58■□□□□ 0.25
SMC4-209ENST00000468653 TMEM127O75204 238 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 TPOP07202 933 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 GABRA1P14867 456 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 GNALP38405 381 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 EVX1P49640 407 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 GUSBP1Q15486 140 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 SFRP5Q5T4F7 317 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 ASPHD2Q6ICH7 369 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 TFAP2EQ6VUC0 442 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 DOK3Q7L591 496 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 FAM71F1Q96KD3 344 aaPredicted RBP16.58■□□□□ 0.24
SMC4-209ENST00000468653 ABCB10Q9NRK6 738 aa16.58■□□□□ 0.24
SMC4-209ENST00000468653 CACNA1GO43497 2377 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 PTPRQQ9UMZ3 2332 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 UPK1BO75841 260 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 HLA-HP01893 362 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 CD79AP11912 226 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 ZNF20P17024 532 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 IGFBP3P17936 291 aaPredicted RBP16.57■□□□□ 0.24
SMC4-209ENST00000468653 ELK1P19419 428 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 ANOS1P23352 680 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 ANKRD16Q6P6B7 361 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 LRRC28Q86X40 367 aaPredicted RBP16.57■□□□□ 0.24
SMC4-209ENST00000468653 SERPINA12Q8IW75 414 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 OR1J2Q8NGS2 313 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 OR5H6Q8NGV6 325 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 SNRNP27Q8WVK2 155 aaKnown RBP16.57■□□□□ 0.24
SMC4-209ENST00000468653 OR10A2Q9H208 303 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 ZNF224Q9NZL3 707 aa16.57■□□□□ 0.24
SMC4-209ENST00000468653 A0A0U1RQV5 110 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ITGA5P08648 1049 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ZNF12P17014 697 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 CCL1P22362 96 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 TALDO1P37837 337 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 PER3P56645 1201 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 CISD2Q8N5K1 135 aaKnown RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 OR52H1Q8NGJ2 320 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 OR1K1Q8NGR3 316 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ADAT3Q96EY9 351 aaPredicted RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 MRI1Q9BV20 369 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 SP140LQ9H930 580 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 SPATA2Q9UM82 520 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ARHGAP21Q5T5U3 1957 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 DMXL2Q8TDJ6 3036 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 SVILO95425 2214 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 MEGF11A6BM72 1044 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 C5orf63A6NC05 138 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 E9PLN8 166 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 WDR1O75083 606 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 IL18BPO95998 194 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 EIF4EP06730 217 aaKnown RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 ARR3P36575 388 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 KIR2DL2P43627 348 aaPredicted RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 IFITM3Q01628 133 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 MADCAM1Q13477 382 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ZNF79Q15937 498 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ZNF181Q2M3W8 571 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 KRTAP27-1Q3LI81 207 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 ZNF324BQ6AW86 544 aaPredicted RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 TMEM53Q6P2H8 277 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 XKRXQ6PP77 449 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 METAP1DQ6UB28 335 aaPredicted RBP16.56■□□□□ 0.24
SMC4-209ENST00000468653 Q8NA96 180 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 OR5D14Q8NGL3 314 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 OR6K3Q8NGY3 331 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 LGALS14Q8TCE9 139 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 CCDC32Q9BV29 185 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 LIN7BQ9HAP6 207 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 EXTL2Q9UBQ6 330 aa16.56■□□□□ 0.24
SMC4-209ENST00000468653 A6NIN4 97 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 FIGNL2A6NMB9 653 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 TTLL8A6PVC2 850 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 LCATP04180 440 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 C1QTNF9P0C862 333 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 AZGP1P25311 298 aaKnown RBP16.55■□□□□ 0.24
SMC4-209ENST00000468653 PTGER4P35408 488 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 CLDN12P56749 244 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 TGFBR3Q03167 851 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 SPOCK1Q08629 439 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 IL18Q14116 193 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 PYDC2Q56P42 97 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 GLT8D1Q68CQ7 371 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 OR8H2Q8N162 312 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 PLPP7Q8NBV4 271 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 CPEB3Q8NE35 698 aaKnown RBP16.55■□□□□ 0.24
SMC4-209ENST00000468653 BCL2L2Q92843 193 aaPredicted RBP16.55■□□□□ 0.24
SMC4-209ENST00000468653 SOX7Q9BT81 388 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 SRRQ9GZT4 340 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 PLEKHA1Q9HB21 404 aa16.55■□□□□ 0.24
SMC4-209ENST00000468653 CYSLTR2Q9NS75 346 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms