RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 TTPAP49638 278 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 VSX2P58304 361 aaPredicted RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF121P58317 390 aaPredicted RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TAS2R41P59536 307 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ESRRGP62508 458 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RBX1P62877 108 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 BTN3A2P78410 334 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ARG2P78540 354 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF85Q03923 595 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TRIP6Q15654 476 aaKnown RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 HLA-DRB5Q30154 266 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TTLL9Q3SXZ7 439 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 FAM120AOSQ5T036 256 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RWDD4Q6NW29 188 aaKnown RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TMEM207Q6UWW9 146 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 WDR82Q6UXN9 313 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 CYHR1Q6ZMK1 362 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SH2D5Q6ZV89 423 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 NIT1Q86X76 327 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 CCDC71Q8IV32 467 aaPredicted RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 CPNE9Q8IYJ1 553 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 PRR22Q8IZ63 422 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 FBXL14Q8N1E6 418 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF561Q8N587 486 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 KLHDC9Q8NEP7 349 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 OR10K1Q8NGX5 313 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 OR8U1Q8NH10 309 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 C11orf45Q8TAV5 145 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 FNDC8Q8TC99 324 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 HAVCR2Q8TDQ0 301 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 C16orf78Q8WTQ4 265 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 KCTD4Q8WVF5 259 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RASL10AQ92737 203 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SARAFQ96BY9 339 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RCN3Q96D15 328 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 MAGEB18Q96M61 343 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZIM3Q96PE6 472 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 QKIQ96PU8 341 aaKnown RBP eCLIP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SEC22CQ9BRL7 303 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TMED9Q9BVK6 235 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 CSTL1Q9H114 145 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ALX4Q9H161 411 aaPredicted RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 C11orf49Q9H6J7 331 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF442Q9H7R0 627 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 UGT1A8Q9HAW9 530 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ZBTB20Q9HC78 741 aaPredicted RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ELOVL5Q9NYP7 299 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 TREM2Q9NZC2 230 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 IL36RNQ9UBH0 155 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SEC14L4Q9UDX3 406 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 BTNL2Q9UIR0 455 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 RALYQ9UKM9 306 aaKnown RBP3.1□□□□□ -1.91
CDHR3-206ENST00000468477 NTNG1Q9Y2I2 539 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SNX10Q9Y5X0 201 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 SLC22A7Q9Y694 548 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 PCDH11XQ9BZA7 1347 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 ARHGEF10O15013 1369 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 NID2Q14112 1375 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 CEP152O94986 1710 aa3.1□□□□□ -1.91
CDHR3-206ENST00000468477 WDR7Q9Y4E6 1490 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 COL22A1Q8NFW1 1626 aaPredicted RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 IGLV3-22A0A075B6J6 115 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 IGHV4-28A0A0C4DH34 117 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF98A6NK75 572 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 CLDN24A6NM45 220 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 MGST3O14880 152 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 TCAPO15273 167 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SPRY3O43610 288 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SYNGR1O43759 233 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 ZG16O60844 167 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 RAMP1O60894 148 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 BCAR3O75815 825 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 KLF8O95600 359 aaPredicted RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 IFNA2P01563 188 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 CD8AP01732 235 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 PCCAP05165 728 aaPredicted RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 CTSLP07711 333 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 FAM228BP0C875 321 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SCGB1A1P11684 91 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 CDH1P12830 882 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 ZNF17P17021 662 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 AKR1C4P17516 323 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 RPL35AP18077 110 aaKnown RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 GABRG2P18507 467 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SDC1P18827 310 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 ALOX5APP20292 161 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 C4BPBP20851 252 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 LOXP28300 417 aaPredicted RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 RPL12P30050 165 aaKnown RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 PYCR1P32322 319 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 HRH1P35367 487 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 TSFMP43897 325 aaKnown RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 GABRA4P48169 554 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SRP9P49458 86 aaKnown RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 HOXA1P49639 335 aaPredicted RBP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SULT1A1P50225 295 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SULT1A2P50226 295 aa3.09□□□□□ -1.91
CDHR3-206ENST00000468477 SUB1P53999 127 aaKnown RBP eCLIP3.09□□□□□ -1.91
CDHR3-206ENST00000468477 AP1S2P56377 157 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms