RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CENPAP49450 140 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 ZNF81P51508 661 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 CCL8P80075 99 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 CARTPTQ16568 116 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 CYB5R2Q6BCY4 276 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 ACSM5Q6NUN0 579 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 TMEM154Q6P9G4 183 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 SHQ1Q6PI26 577 aaKnown RBP9.47□□□□□ -0.89
COL4A6-205ENST00000468338 FBXW12Q6X9E4 464 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 LHFPL2Q6ZUX7 228 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 HIPK1Q86Z02 1210 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 LINC00346Q8IVM7 164 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 OR10S1Q8NGN2 331 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 PTP4A1Q93096 173 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 APOBEC3DQ96AK3 386 aaPredicted RBP9.47□□□□□ -0.89
COL4A6-205ENST00000468338 MSI2Q96DH6 328 aaKnown RBP9.47□□□□□ -0.89
COL4A6-205ENST00000468338 MEGF10Q96KG7 1140 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 SOX7Q9BT81 388 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 C1QTNF5Q9BXJ0 243 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 DDX28Q9NUL7 540 aaKnown RBP9.47□□□□□ -0.89
COL4A6-205ENST00000468338 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
COL4A6-205ENST00000468338 ZDHHC8Q9ULC8 765 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 COMMD3-BMI1R4GMX3 469 aa9.47□□□□□ -0.89
COL4A6-205ENST00000468338 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.89
COL4A6-205ENST00000468338 A0A1B0GWJ7 208 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 LRP5LA4QPB2 252 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 GNGT2O14610 69 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 IFNGP01579 166 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ACSM4P0C7M7 580 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 OSMP13725 252 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ZNF823P16415 610 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 PRKACGP22612 351 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 CHN2P52757 468 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 BLVRAP53004 296 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 CDK5Q00535 292 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 TRIP10Q15642 601 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 SLC27A4Q6P1M0 643 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ASRGL1Q7L266 308 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-205ENST00000468338 PROKR2Q8NFJ6 384 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 OR51L1Q8NGJ5 315 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 OR9Q1Q8NGQ5 310 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 TEX47Q8TBZ9 253 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 CMBLQ96DG6 245 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 DIRC2Q96SL1 478 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 PITX2Q99697 317 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ATF6BQ99941 703 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 HCAR1Q9BXC0 346 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 WDR76Q9H967 626 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 MARCH7Q9H992 704 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 YAE1D1Q9NRH1 226 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 ZNF275Q9NSD4 429 aaPredicted RBP9.46□□□□□ -0.9
COL4A6-205ENST00000468338 DYSFO75923 2080 aa9.46□□□□□ -0.9
COL4A6-205ENST00000468338 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 PLSCR5A0PG75 271 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 SHISA3A0PJX4 238 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 TVP23AA6NH52 213 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 RIIAD1A6NNX1 92 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 H3BN98 237 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 SPRY3O43610 288 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 E2F6O75461 281 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 TIPRLO75663 272 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 HLA-DQA2P01906 255 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 CLUP10909 449 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 ZNF3P17036 446 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 FMO3P31513 532 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 IL2RGP31785 369 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 RPS27P42677 84 aaKnown RBP9.45□□□□□ -0.9
COL4A6-205ENST00000468338 GPR6P46095 362 aaPredicted RBP9.45□□□□□ -0.9
COL4A6-205ENST00000468338 ENTPD1P49961 510 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 ERFP50548 548 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 GINS1Q14691 196 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 TSTQ16762 297 aaKnown RBP9.45□□□□□ -0.9
COL4A6-205ENST00000468338 ZMAT1Q5H9K5 638 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 Q6ZR03 302 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 PRIMA1Q86XR5 153 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 PARP8Q8N3A8 854 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 IQCF1Q8N6M8 205 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 OR5L1Q8NGL2 311 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 OR2AJ1Q8NGZ0 328 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 ST7LQ8TDW4 575 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 DNAJC9Q8WXX5 260 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 CDADC1Q9BWV3 514 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 SAP30LQ9HAJ7 183 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 MSL2Q9HCI7 577 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
COL4A6-205ENST00000468338 IGHV1-69-2A0A0G2JMI3 117 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 F5H5K5 113 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 ZNF593O00488 134 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-205ENST00000468338 WNT9BO14905 357 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 SURF4O15260 269 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 TIMM8AO60220 97 aaPredicted RBP9.44□□□□□ -0.9
COL4A6-205ENST00000468338 LMX1BO60663 402 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 CDC14BO60729 498 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 HMGN1P05114 100 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 GYPBP06028 91 aa9.44□□□□□ -0.9
COL4A6-205ENST00000468338 DAPP51397 102 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms