RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ZNF799Q96GE5 643 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 OR2V2Q96R30 315 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 COPS4Q9BT78 406 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 HIF1ANQ9NWT6 349 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 UBAP1Q9NZ09 502 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 ZANQ9Y493 2812 aa9.76□□□□□ -0.85
CDHR3-205ENST00000468143 NSD1Q96L73 2696 aaPredicted RBP9.76□□□□□ -0.85
CDHR3-205ENST00000468143 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 IQCF6A8MYZ5 107 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PRR23D1E9PI22 279 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 F5H5P2 479 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SURF4O15260 269 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 MLNRO43193 412 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PLPP2O43688 288 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 ATP5HO75947 161 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 MSMBP08118 114 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PRR23D2P0DMB1 279 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 ANXA8P13928 327 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 HOXB6P17509 224 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 TNFRSF1AP19438 455 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 HNF1AP20823 631 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 GSTT1P30711 240 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 RASSF2P50749 326 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 DVL1P1P54792 670 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 CDK5Q00535 292 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SRSF2Q01130 221 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SLC3A1Q07837 685 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 MALLQ13021 153 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PCK2Q16822 640 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 KLHL12Q53G59 568 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 FAHD2BQ6P2I3 314 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SHQ1Q6PI26 577 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 MRPL21Q7Z2W9 205 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 DPY19L4Q7Z388 723 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PEG10Q86TG7 708 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 GLCCI1Q86VQ1 547 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 CPOQ8IVL8 374 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 OR13G1Q8NGZ3 307 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 OR2AE1Q8NHA4 323 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 ZNF420Q8TAQ5 688 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 ST7LQ8TDW4 575 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 UTP4Q969X6 686 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 TMEM186Q96B77 213 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 ZMYND19Q96E35 227 aaPredicted RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 FAHD2AQ96GK7 314 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 KCNJ15Q99712 375 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 GAL3ST1Q99999 423 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SLC30A2Q9BRI3 323 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 DDX28Q9NUL7 540 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 TMEM100Q9NV29 134 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 IL19Q9UHD0 177 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 PPP1R3CQ9UQK1 317 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 NPTNQ9Y639 398 aa9.75□□□□□ -0.85
CDHR3-205ENST00000468143 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 YLPM1P49750 1951 aaKnown RBP9.75□□□□□ -0.85
CDHR3-205ENST00000468143 SELENOFO60613 162 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 MITFO75030 526 aaPredicted RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 DEAF1O75398 565 aaPredicted RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 GLCEO94923 617 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 ZNF205O95201 554 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 IGHV2-5P01817 119 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 HMGN1P05114 100 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 SELEP16581 610 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 PAICSP22234 425 aaKnown RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 SRP14P37108 136 aaKnown RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 DAPP51397 102 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 BLVRAP53004 296 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 ZNF92Q03936 586 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 TEX30Q5JUR7 227 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 GLYATL3Q5SZD4 288 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 C1orf146Q5VVC0 180 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 DRAM2Q6UX65 266 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 PGAP1Q75T13 922 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 AMIGO2Q86SJ2 522 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 BBS1Q8NFJ9 593 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 OR51F2Q8NH61 342 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 SPRYD4Q8WW59 207 aaPredicted RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 PLEKHA8Q96JA3 519 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 MEGF10Q96KG7 1140 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 INTS14Q96SY0 518 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 AMELYQ99218 206 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 ABHD6Q9BV23 337 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 GCM1Q9NP62 436 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 PAPOLBQ9NRJ5 636 aaKnown RBP9.74□□□□□ -0.85
CDHR3-205ENST00000468143 TVP23BQ9NYZ1 205 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 KIF17Q9P2E2 1029 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 NAV3Q8IVL0 2385 aa9.74□□□□□ -0.85
CDHR3-205ENST00000468143 CHD3Q12873 2000 aaKnown RBP9.73□□□□□ -0.85
CDHR3-205ENST00000468143 ABCA2Q9BZC7 2435 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 GGT3PA6NGU5 568 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 ZNF878C9JN71 531 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 TBX1O43435 398 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 IGHV2-70P01814 119 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 ANXA2P07355 339 aaKnown RBP9.73□□□□□ -0.85
CDHR3-205ENST00000468143 ANPEPP15144 967 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 CA6P23280 308 aa9.73□□□□□ -0.85
CDHR3-205ENST00000468143 SRP9P49458 86 aaKnown RBP9.73□□□□□ -0.85
CDHR3-205ENST00000468143 HCCSP53701 268 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms