RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SKP2Q13309 424 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 ISXQ2M1V0 245 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 RTL8AQ9BWD3 113 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 NECAP2Q9NVZ3 263 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 PLA2G3Q9NZ20 509 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 TMEM200CA6NKL6 621 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 SULT1C2O00338 296 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 SELEP16581 610 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 MSMO1Q15800 293 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 BAK1Q16611 211 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 REEP6Q96HR9 211 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 CMTM3Q96MX0 182 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 GPR87Q9BY21 358 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 TRGV5A0A0B4J1U4 118 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 HES3Q5TGS1 186 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 LHFPL2Q6ZUX7 228 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 FJX1Q86VR8 437 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 GABRG1Q8N1C3 465 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 WDFY2Q96P53 400 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 NKX3-1Q99801 234 aaPredicted RBP12.38□□□□□ -0.43
BRAT1-203ENST00000467558 SLC25A31Q9H0C2 315 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 RGCCQ9H4X1 137 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 WDR54Q9H977 334 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 CTLA4P16410 223 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 ZXDAP98168 799 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 OR10K2Q6IF99 312 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 MDGA2Q7Z553 956 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 DEFB124Q8NES8 71 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 OR10K1Q8NGX5 313 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
BRAT1-203ENST00000467558 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 TRAPPC4Q9Y296 219 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
BRAT1-203ENST00000467558 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 MSL3P1P0C860 447 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 NPY4RP50391 375 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 FBXW12Q6X9E4 464 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 TCEAL3Q969E4 200 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 ZNF436Q9C0F3 470 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 PROCRQ9UNN8 238 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 ALOX5APP20292 161 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 PAN3Q58A45 887 aaKnown RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 HAGHLQ6PII5 290 aaPredicted RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 PTP4A1Q93096 173 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 FBXL2Q9UKC9 423 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 DTX4Q9Y2E6 619 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 CACNA1IQ9P0X4 2223 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 XRCC3O43542 346 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 GRPP07492 148 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 IFI6P09912 130 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 ATF1P18846 271 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 LTBRP36941 435 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRAT1-203ENST00000467558 AADACL3Q5VUY0 350 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 C1QL3Q5VWW1 255 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 ABHD5Q8WTS1 349 aa12.37□□□□□ -0.43
BRAT1-203ENST00000467558 GCM2O75603 506 aaPredicted RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 HPP00738 406 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 RFX2P48378 723 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 MMP15P51511 669 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 RPS23P62266 143 aaKnown RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 BLOC1S1P78537 153 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 OPCMLQ14982 345 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 RHEBQ15382 184 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 C9orf40Q8IXQ3 194 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 SLC25A45Q8N413 288 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 HRASLSQ9HDD0 168 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 ASF1BQ9NVP2 202 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 SPTBP11277 2137 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 CKAP5Q14008 2032 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 TBPP20226 339 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 PTGS2P35354 604 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 RAB31Q13636 194 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 AKR7LQ8NHP1 331 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 CT55Q8WUE5 264 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 PATJQ8NI35 1801 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 H7C2Y5 167 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 K7EPK0 472 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 DEGS1O15121 323 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 CYC1P08574 325 aa12.36□□□□□ -0.43
BRAT1-203ENST00000467558 ANXA7P20073 488 aaKnown RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 RPS27AP62979 156 aaKnown RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 UBA52P62987 128 aaKnown RBP12.36□□□□□ -0.43
BRAT1-203ENST00000467558 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms