RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TVP23AA6NH52 213 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 H3BSH0 61 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 F10P00742 488 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 CEACAM6P40199 344 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 NDUFA6P56556 154 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 GAS6Q14393 721 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 YOD1Q5VVQ6 348 aaPredicted RBP16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 NKAIN2Q5VXU1 208 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 CCDC54Q8NEL0 328 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 IP6K3Q96PC2 410 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 LMAN1LQ9HAT1 526 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 PRTFDC1Q9NRG1 225 aa16.2■□□□□ 0.18
SNAPC3-205ENST00000467062 C9JQL5 133 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 AK1P00568 194 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 SLC6A6P31641 620 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 CYB5R2Q6BCY4 276 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 CBLN3Q6UW01 205 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 UNQ6494/PRO21346Q6UXR6 183 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 ZNF227Q86WZ6 799 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 BCORP1Q8N888 145 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 TCTN2Q96GX1 697 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 DGAT2Q96PD7 388 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 CSAG2Q9Y5P2 127 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 ASXL3Q9C0F0 2248 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 H7C1Q1 480 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 RNH1P13489 461 aaKnown RBP16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 SLC26A5P58743 744 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 EIF5AP63241 154 aaKnown RBP16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 RHEBQ15382 184 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 KIAA0895LQ68EN5 471 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 ULK3Q6PHR2 472 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 TMPRSS12Q86WS5 348 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 ZNF511Q8NB15 262 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 TGM7Q96PF1 710 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 CDC6Q99741 560 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 TRIM2Q9C040 744 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 OR10A5Q9H207 317 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 CHRNA9Q9UGM1 479 aa16.19■□□□□ 0.18
SNAPC3-205ENST00000467062 TRAV18A0A075B6X5 111 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 ADAM10O14672 748 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 MED6O75586 246 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 HCKP08631 526 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 SLC6A9P48067 706 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 LSM6P62312 80 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 NHLH2Q02577 135 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 HIST2H3AQ71DI3 136 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 LYG2Q86SG7 212 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 C10orf53Q8N6V4 93 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 SECTM1Q8WVN6 248 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 KLHDC7BQ96G42 594 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 CNN2Q99439 309 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 PHB2Q99623 299 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 PRO1933Q9H354 126 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 Q9N2J8 555 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 SOHLH2Q9NX45 425 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 TRBV6-7A0A0A0MS04 114 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 CDC14CA4D256 554 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 EIF1AYO14602 144 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 AGPAT2O15120 278 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 WNT11O96014 354 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 MBP02144 154 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 AMY2AP04746 511 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 GPR3P46089 330 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 EIF1AXP47813 144 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 SULT1A1P50225 295 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 RAB1AP62820 205 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 TOMM20Q15388 145 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 ACTBL2Q562R1 376 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 ZNF585AQ6P3V2 769 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 POMZP3Q6PJE2 187 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 BTNL8Q6UX41 500 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 PRR22Q8IZ63 422 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 PNLDC1Q8NA58 520 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 OR1J1Q8NGS3 322 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 RAB24Q969Q5 203 aa16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 LMF2Q9BU23 707 aaKnown RBP16.18■□□□□ 0.18
SNAPC3-205ENST00000467062 IGHV5-51A0A0C4DH38 117 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 MKRN2OSH3BPM6 223 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 KCNAB3O43448 404 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 CTAG2O75638 210 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 PMP2P02689 132 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 PAX1P15863 534 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 LPAR6P43657 344 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 CD226Q15762 336 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 PRTGQ2VWP7 1150 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 SLC35F2Q8IXU6 374 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 FKRPQ9H9S5 495 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 BCO1Q9HAY6 547 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 FAM221BA6H8Z2 402 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 NDUFB2O95178 105 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 CRHP06850 196 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 DAOP14920 347 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 RPS27P42677 84 aaKnown RBP16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 PPICP45877 212 aa16.17■□□□□ 0.18
SNAPC3-205ENST00000467062 OR1D4P47884 311 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms