RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 MEOX1P50221 254 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 LHX2P50458 406 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
UBE4B-206ENST00000466379 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
UBE4B-206ENST00000466379 DMRTC1Q5HYR2 192 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 FAAP20Q6NZ36 180 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 OR1M1Q8NGA1 313 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 DPAGT1Q9H3H5 408 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 NIPAL2Q9H841 368 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 MOB1AQ9H8S9 216 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 PLEKHA1Q9HB21 404 aa11.93□□□□□ -0.5
UBE4B-206ENST00000466379 TRAV18A0A075B6X5 111 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CIB4A0PJX0 185 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 GGT3PA6NGU5 568 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CDRT15L2A8MXV6 281 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 NKX2-8O15522 239 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 XRCC3O43542 346 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 GMDSO60547 372 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 SP1P08047 785 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 BDKRB2P30411 391 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 SLC6A9P48067 706 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 SCAND1P57086 179 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CD83Q01151 205 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 C3AR1Q16581 482 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 SFRP4Q6FHJ7 346 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-206ENST00000466379 RHOUQ7L0Q8 258 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 OR6M1Q8NGM8 313 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CPNE4Q96A23 557 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-206ENST00000466379 INTS12Q96CB8 462 aaKnown RBP11.92□□□□□ -0.5
UBE4B-206ENST00000466379 SPACA5Q96QH8 159 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CACNG6Q9BXT2 260 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 CNTD2Q9H8S5 307 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 RANGRFQ9HD47 186 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-206ENST00000466379 HRASLSQ9HDD0 168 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 RHBDD3Q9Y3P4 386 aa11.92□□□□□ -0.5
UBE4B-206ENST00000466379 ARPC4-TTLL3A0A0A6YYG9 625 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 SULT1B1O43704 296 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 TCRBP04435 133 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 PATE4P0C8F1 98 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 B4GALT1P15291 398 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 ZNF20P17024 532 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 CLDN18P56856 261 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 RSPO1Q2MKA7 263 aaPredicted RBP11.91□□□□□ -0.5
UBE4B-206ENST00000466379 SLC25A25Q6KCM7 469 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 GPR137CQ8N3F9 429 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 MDS2Q8NDY4 140 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 PGAM5Q96HS1 289 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 FYTTD1Q96QD9 318 aaKnown RBP11.91□□□□□ -0.5
UBE4B-206ENST00000466379 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
UBE4B-206ENST00000466379 RABL2BQ9UNT1 228 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 NME2P1O60361 137 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 CYTIPO60759 359 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 NME2P22392 152 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 HLA-DMAP28067 261 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 ELFN2Q5R3F8 820 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 TMPRSS7Q7RTY8 843 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
UBE4B-206ENST00000466379 LYPD6Q86Y78 171 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 ARPC5LQ9BPX5 153 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 ASCL3Q9NQ33 180 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 RBMX2Q9Y388 322 aaKnown RBP11.91□□□□□ -0.5
UBE4B-206ENST00000466379 CSAG2Q9Y5P2 127 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 LIPGQ9Y5X9 500 aa11.91□□□□□ -0.5
UBE4B-206ENST00000466379 LOC390937A0A1W2PQ73 354 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ACOT7O00154 380 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 CD37P11049 281 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 MNDAP41218 407 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 MRPS34P82930 218 aaKnown RBP11.9□□□□□ -0.5
UBE4B-206ENST00000466379 CBX3Q13185 183 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 DYRK1AQ13627 763 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 KCNJ8Q15842 424 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 C1orf100Q5SVJ3 147 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 HIST2H3PS2Q5TEC6 136 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ZNF627Q7L945 461 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ADGRE4PQ86SQ3 457 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 NKAIN3Q8N8D7 197 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 OR5D14Q8NGL3 314 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 ITFG2Q969R8 447 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 RNF170Q96K19 258 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 LYZL4Q96KX0 146 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 DIABLOQ9NR28 239 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 TMEM38BQ9NVV0 291 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 RTTNQ86VV8 2226 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 TRAPPC2P0DI81 140 aa11.9□□□□□ -0.5
UBE4B-206ENST00000466379 TRAPPC2BP0DI82 140 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms