RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 STUMQ69YW2 141 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 PRMT9Q6P2P2 845 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 EIF3MQ7L2H7 374 aaKnown RBP2.02□□□□□ -2.09
SMC4-205ENST00000465563 APRG1Q8IVJ8 170 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 METTL13Q8N6R0 699 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 CHST4Q8NCG5 386 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 OR8U1Q8NH10 309 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 C17orf50Q8WW18 174 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 ECHDC3Q96DC8 303 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 RNF145Q96MT1 663 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 ZNF317Q96PQ6 595 aaPredicted RBP2.02□□□□□ -2.09
SMC4-205ENST00000465563 CAMK2N2Q96S95 79 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 TEKT3Q9BXF9 490 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 SLC7A5P2Q9GIP4 190 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 AGPAT4Q9NRZ5 378 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 MMACHCQ9Y4U1 282 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 IGHV1OR15-9A0A0B4J2B8 117 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 A0A0J9YXV3 536 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 H7C1H1 209 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 RAD51BO15315 384 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 ERI3O43414 337 aaKnown RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 MPZL1O95297 269 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 HLA-HP01893 362 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 CLTAP09496 248 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 LINC00869P0C866 280 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 ERGP11308 486 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 CSNK2A2P19784 350 aaPredicted RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 HCAR3P49019 387 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 P2RX1P51575 399 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 GFERP55789 205 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 ZNF121P58317 390 aaPredicted RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 FAM78AQ5JUQ0 283 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 TWF2Q6IBS0 349 aaKnown RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 BHLHA15Q7RTS1 189 aaPredicted RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 SLC16A13Q7RTY0 426 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 KATNAL2Q8IYT4 538 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 COX18Q8N8Q8 333 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 OR4K5Q8NGD3 323 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 COQ8AQ8NI60 647 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 APH1BQ8WW43 257 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 RGP1Q92546 391 aaPredicted RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 PTX4Q96A99 478 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 RPEQ96AT9 228 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 NRBF2Q96F24 287 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 GSDMAQ96QA5 445 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 TIMM17AQ99595 171 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 FOXC2Q99958 501 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 OR52D1Q9H346 318 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 DDX19AQ9NUU7 478 aaKnown RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 PDP1Q9P0J1 537 aaPredicted RBP2.01□□□□□ -2.09
SMC4-205ENST00000465563 CTSFQ9UBX1 484 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 TRIP11Q15643 1979 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 LOXHD1Q8IVV2 1947 aa2.01□□□□□ -2.09
SMC4-205ENST00000465563 UBN2Q6ZU65 1347 aa2□□□□□ -2.09
SMC4-205ENST00000465563 PCDH11XQ9BZA7 1347 aa2□□□□□ -2.09
SMC4-205ENST00000465563 IGLV3-12A0A075B6K2 115 aa2□□□□□ -2.09
SMC4-205ENST00000465563 BCKDKO14874 412 aa2□□□□□ -2.09
SMC4-205ENST00000465563 ZBTB5O15062 677 aa2□□□□□ -2.09
SMC4-205ENST00000465563 RBFOX2O43251 390 aaKnown RBP eCLIP2□□□□□ -2.09
SMC4-205ENST00000465563 REM1O75628 298 aa2□□□□□ -2.09
SMC4-205ENST00000465563 FCN3O75636 299 aa2□□□□□ -2.09
SMC4-205ENST00000465563 VAMP5O95183 116 aa2□□□□□ -2.09
SMC4-205ENST00000465563 FGFR1OPO95684 399 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 LSM8O95777 96 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 HPRT1P00492 218 aa2□□□□□ -2.09
SMC4-205ENST00000465563 APCSP02743 223 aa2□□□□□ -2.09
SMC4-205ENST00000465563 ADRA2AP08913 450 aa2□□□□□ -2.09
SMC4-205ENST00000465563 POLR2MP0CAP2 368 aa2□□□□□ -2.09
SMC4-205ENST00000465563 USF1P22415 310 aaPredicted RBP2□□□□□ -2.09
SMC4-205ENST00000465563 FABP6P51161 128 aa2□□□□□ -2.09
SMC4-205ENST00000465563 CLDN18P56856 261 aa2□□□□□ -2.09
SMC4-205ENST00000465563 VSX2P58304 361 aaPredicted RBP2□□□□□ -2.09
SMC4-205ENST00000465563 UBE2MP61081 183 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 RPS15AP62244 130 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 RPS23P62266 143 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 SPAG1Q07617 926 aa2□□□□□ -2.09
SMC4-205ENST00000465563 NCF4Q15080 339 aa2□□□□□ -2.09
SMC4-205ENST00000465563 IGFBP7Q16270 282 aa2□□□□□ -2.09
SMC4-205ENST00000465563 GCSAMLQ5JQS6 135 aa2□□□□□ -2.09
SMC4-205ENST00000465563 TPTE2P1Q5T6R2 138 aa2□□□□□ -2.09
SMC4-205ENST00000465563 FAM122BQ7Z309 247 aa2□□□□□ -2.09
SMC4-205ENST00000465563 PRSS58Q8IYP2 241 aa2□□□□□ -2.09
SMC4-205ENST00000465563 FAM71AQ8IYT1 594 aa2□□□□□ -2.09
SMC4-205ENST00000465563 JAGN1Q8N5M9 183 aa2□□□□□ -2.09
SMC4-205ENST00000465563 COMMD1Q8N668 190 aa2□□□□□ -2.09
SMC4-205ENST00000465563 BPIFCQ8NFQ6 507 aa2□□□□□ -2.09
SMC4-205ENST00000465563 OR10W1Q8NGF6 305 aa2□□□□□ -2.09
SMC4-205ENST00000465563 OR5AR1Q8NGP9 310 aa2□□□□□ -2.09
SMC4-205ENST00000465563 CIRBP-AS1Q8TBR5 109 aa2□□□□□ -2.09
SMC4-205ENST00000465563 DCPSQ96C86 337 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 FLYWCH2Q96CP2 140 aaKnown RBP2□□□□□ -2.09
SMC4-205ENST00000465563 OPALINQ96PE5 141 aa2□□□□□ -2.09
SMC4-205ENST00000465563 ZNF442Q9H7R0 627 aa2□□□□□ -2.09
SMC4-205ENST00000465563 EDA2RQ9HAV5 297 aa2□□□□□ -2.09
SMC4-205ENST00000465563 BEX1Q9HBH7 125 aa2□□□□□ -2.09
SMC4-205ENST00000465563 SLC17A7Q9P2U7 560 aa2□□□□□ -2.09
SMC4-205ENST00000465563 WDR19Q8NEZ3 1342 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 IGHV3OR16-9A0A0B4J2B5 98 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 OR6C74A6NCV1 312 aa1.99□□□□□ -2.09
SMC4-205ENST00000465563 PDZK1P1A8MUH7 402 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms