RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CFAP77Q6ZQR2 320 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 GVQW1Q8N7I0 195 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 GALNT11Q8NCW6 608 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 NOXO1Q8NFA2 376 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 OR10S1Q8NGN2 331 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 OR51E1Q8TCB6 317 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 WBP1Q96G27 269 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 SHDQ96IW2 340 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 OR5B2Q96R09 309 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 WDR77Q9BQA1 342 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-204ENST00000465425 CRB3Q9BUF7 120 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 REG4Q9BYZ8 158 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 MOB1AQ9H8S9 216 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 COQ3Q9NZJ6 369 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 COMMD9Q9P000 198 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 KLHL13Q9P2N7 655 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 SLC5A6Q9Y289 635 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 OR5H14A6NHG9 310 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 VSIG8P0DPA2 414 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 LIPCP11150 499 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF93P35789 620 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-204ENST00000465425 ZMYND11Q15326 602 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 PDZD9Q8IXQ8 264 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF101Q8IZC7 436 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 SLC38A6Q8IZM9 456 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 NUDCD2Q8WVJ2 157 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 GPN3Q9UHW5 284 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF230Q9UIE0 474 aaPredicted RBP16.28■□□□□ 0.2
SYNE4-204ENST00000465425 VSIG4Q9Y279 399 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 CEP192Q8TEP8 1941 aa16.28■□□□□ 0.2
SYNE4-204ENST00000465425 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
SYNE4-204ENST00000465425 CARD17Q5XLA6 110 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 ZNF660Q6AZW8 331 aaPredicted RBP16.27■□□□□ 0.2
SYNE4-204ENST00000465425 OR52W1Q6IF63 320 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 ANGPTL5Q86XS5 388 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 SLC22A8Q8TCC7 542 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 RNF138Q8WVD3 245 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 KCNMB2Q9Y691 235 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 LHFPL6Q9Y693 200 aa16.27■□□□□ 0.2
SYNE4-204ENST00000465425 ADAMTS20P59510 1910 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 EXPH5Q8NEV8 1989 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 A0A1W2PNR3 127 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 OR14I1A6ND48 311 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 CD8AP01732 235 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 PGA4P0DJD7 388 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 PGA3P0DJD8 388 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 GNB3P16520 340 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 MPGP29372 298 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 NUP62P37198 522 aaPredicted RBP16.27■□□□□ 0.19
SYNE4-204ENST00000465425 PRKXP51817 358 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 STARD6P59095 220 aa16.27■□□□□ 0.19
SYNE4-204ENST00000465425 ABHD12BQ7Z5M8 362 aaPredicted RBP16.27■□□□□ 0.19
SYNE4-204ENST00000465425 A0A0D9SG52 128 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 WIPF3A6NGB9 483 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 STK17BO94768 372 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 IFNA6P05013 189 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 CDAP32320 146 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 HRH1P35367 487 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 GABREP78334 506 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 QRFPP83859 136 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 INPP5JQ15735 1006 aaPredicted RBP16.26■□□□□ 0.19
SYNE4-204ENST00000465425 LRRC37A5PQ49AS3 106 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 GUSBP11Q6P575 273 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 ADPRHL1Q8NDY3 354 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 OR5M9Q8NGP3 310 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 LINC00052Q96N35 136 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 SELENOIQ9C0D9 397 aa16.26■□□□□ 0.19
SYNE4-204ENST00000465425 C19orf25Q9UFG5 118 aaPredicted RBP16.26■□□□□ 0.19
SYNE4-204ENST00000465425 A0A1B0GTI1 187 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 MGMTP16455 207 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF43P17038 809 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 PTGDSP41222 190 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 IL13RA1P78552 427 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 SHBQ15464 509 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 SLC22A6Q4U2R8 563 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 LYG2Q86SG7 212 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 ZDHHC22Q8N966 263 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 OR10R2Q8NGX6 335 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 ASH2LQ9UBL3 628 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 IGLV3-32A0A0A0MS00 114 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 CCSO14618 274 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 SLC2A1P11166 492 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 SFTPDP35247 375 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 GSK3AP49840 483 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 BAMBIQ13145 260 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 DTWD2Q8NBA8 298 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 SPACA5Q96QH8 159 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 PHB2Q99623 299 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 DUSP23Q9BVJ7 150 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 PPA2Q9H2U2 334 aa16.25■□□□□ 0.19
SYNE4-204ENST00000465425 ASCC3Q8N3C0 2202 aaKnown RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 KRBOX1C9JBD0 128 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 TRAF3IP2O43734 574 aaPredicted RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 RLN2P04090 185 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DCNP07585 359 aaKnown RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 UBBP0CG47 229 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 PNLIPP16233 465 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms