RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 SLC15A1P46059 708 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 EVX1P49640 407 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 ERVS71-1P61550 626 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 PPP1CBP62140 327 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 RFPL4BQ6ZWI9 263 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 SPATC1Q76KD6 591 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 OR10S1Q8NGN2 331 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 OTOSQ8NHW6 89 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 SYNPRQ8TBG9 265 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 ST7LQ8TDW4 575 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 THEM6Q8WUY1 208 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 RFKQ969G6 155 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 UBE2FQ969M7 185 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 COG8Q96MW5 612 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 CNN2Q99439 309 aaKnown RBP15.16■□□□□ 0.02
COL7A1-205ENST00000465238 SYT3Q9BQG1 590 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 COPS4Q9BT78 406 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 ABHD6Q9BV23 337 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
COL7A1-205ENST00000465238 DDX28Q9NUL7 540 aaKnown RBP15.16■□□□□ 0.02
COL7A1-205ENST00000465238 WARS2Q9UGM6 360 aaKnown RBP15.16■□□□□ 0.02
COL7A1-205ENST00000465238 IGHV4-61A0A0C4DH41 118 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 LOC100289279A0A1B0GTE1 492 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 ZNF878C9JN71 531 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 SLC16A6O15403 523 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 MPZL2O60487 215 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 LYNP07948 512 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 ERCC1P07992 297 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 MRPL3P09001 348 aaKnown RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 ZNF250P15622 560 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 TUBG1P23258 451 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 KLF3P57682 345 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 SNRPGP62308 76 aaKnown RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 MSMPQ1L6U9 139 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 RSPO1Q2MKA7 263 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 SPATA46Q5T0L3 261 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 MEDAGQ5VYS4 303 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 OR5L1Q8NGL2 311 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 SLC25A40Q8TBP6 338 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 NEU4Q8WWR8 484 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 APOBEC3DQ96AK3 386 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 ZNF582Q96NG8 517 aaPredicted RBP15.15■□□□□ 0.02
COL7A1-205ENST00000465238 DOK1Q99704 481 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 APOL4Q9BPW4 351 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 DYNLRB1Q9NP97 96 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 TUBG2Q9NRH3 451 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 DNAJC27Q9NZQ0 273 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 LAMP5Q9UJQ1 280 aa15.15■□□□□ 0.02
COL7A1-205ENST00000465238 A0A1W2PPW3 197 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 TMEM129A0AVI4 362 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 J3QW42 95 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 M0R135 149 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 DLGAP1O14490 977 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 ACSM4P0C7M7 580 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 HSD11B1P28845 292 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 HTR1FP30939 366 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 GRB2P62993 217 aaKnown RBP15.14■□□□□ 0.01
COL7A1-205ENST00000465238 MOGQ16653 247 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 KRTAP27-1Q3LI81 207 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 SLC25A30Q5SVS4 291 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 TTC23Q5W5X9 447 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 LRP11Q86VZ4 500 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-205ENST00000465238 DHRSXQ8N5I4 330 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 RNF133Q8WVZ7 376 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 CYGBQ8WWM9 190 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 ZNF799Q96GE5 643 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 MARS2Q96GW9 593 aaKnown RBP15.14■□□□□ 0.01
COL7A1-205ENST00000465238 KCNJ15Q99712 375 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 OR2J1Q9GZK6 312 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 BPESC1Q9GZL8 116 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 CHODLQ9H9P2 273 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 HAO2Q9NYQ3 351 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 GPR160Q9UJ42 338 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 STARD10Q9Y365 291 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 TMEM14AQ9Y6G1 99 aa15.14■□□□□ 0.01
COL7A1-205ENST00000465238 SNTNA6NMZ2 147 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 CLPTM1O96005 669 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 APOC1P02654 83 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 LCATP04180 440 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 H2BFMP0C1H6 154 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 SRD5A1P18405 259 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 ALOX5APP20292 161 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 HNF1AP20823 631 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 GIFP27352 417 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 ATP6V1E1P36543 226 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 SLC6A9P48067 706 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 PRKXP51817 358 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 HCCSP53701 268 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 POU4F2Q12837 409 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 TMED1Q13445 227 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 OCLNQ16625 522 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 DRAM2Q6UX65 266 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 RHOUQ7L0Q8 258 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 ZNF283Q8N7M2 679 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 OR51G2Q8NGK0 314 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 KLF14Q8TD94 323 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-205ENST00000465238 Q96MT0 163 aa15.13■□□□□ 0.01
COL7A1-205ENST00000465238 AMELYQ99218 206 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms